Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0775 ATGTTCAAGTCATGGAGCAAGAAGAACAAGATCAAAGCTGTGTTCAAACTGGAATTTCAGGCAACTCAGGTGCCAAAGATGAAAAAGTCTGCAATAATGGTATCTTTGGTGCCAGATGATGTTGGGAAGCCAACAGTGAAACTAGAGAAAACTGCTGTCCAAGATGGGACCTGCTCATGGGAGAATCCAATTTTTGAATCAGTTAAACTTGTTAGGGATGCAAAATCAGGAAAAATCCATGAGAAAATCTACCATTTCATTGTTTCAACTGGATCTTCAAAATCTGGCTTTCTTGGAGAAGCCTCAATTGATTTCGCTGATTTTGTTGCAGAAACTGAGCCAATTACTATTTCTCTACCCCTAAAGTTTGCAAATTCAGGCATAGTTTTACATGTGACTATTCAGAACGTGGAAGGATATATTGCTGAAAGAAATGGGGAAGATAATGGAGCTGAGGGACTTTGCAGTGATGGAAGCTTGAGACACCAGCTGAGCTATGGCAGTACGGATCATGAAAGTTATAATGTTGAAaATGGGCACATGGCGAGGACCAGATCTGAGTATTCTGAACAAGATGCATCTAATGGCATCAGTCCTGGTGTAGCTTCATGGGAGGATCCTTATAACTTCAGACAAAATTCAATATCATCAAAAGGAAATGTCAGGGCCACTGCAACAGAAACCCAAGTGCATAAGAGGTCAAACACAAACTGGTCAATTGGTTCAGCATCAGATGGAAGTTTAGGTGACTGGACTAACAGCCTGGAAGATAATCTTCCAAGAGAAAGATTACAAGAGCCTTCAGATAATGCCACTGAAAGGCTCAAAAGTGAAATTTCTTCTTTAAAGAGGCAGGCTGAACTATCAGAACTAGAGTTACAATCACTTCGAAAgcagatagaaaaagaaagcaatagGGGACAGAATTTGTCAAGACAAATAATCAGCCTCAGAGAGGAGAGAGATTCGTTCAAAACCAAATATGAGCAACTCAAGTCCCAGCAGAACTTCAATAATGAGCCCAAAACTATCTCTAAAACCTTCAAGTCTGAGATTGAAGATACTAGGCTTCAGTTAGAGGCAATAAAGGAAGAGCTTGTTTATGAAAAGGAATTGAGTGCCAATCTCCAATTGCAATTGCGGAAAACACAAAACTCAAACTCTGAATTACTTTTGGCCGTGACAGACCTTGAAGCAATGCTGgaagaaaagaataaggaaataTTGGATCTATCTACCAATATAAAATCCCAAAAGACTACTAAAGAGCATGATGATGCCACAAAATTAGATCTCTTGCGGCAGAAAGTTGCAGACCAGAATGATGAAATAGACAATTACTATCAGCAACGCGAAGAGCTAAGTGAGCAAATTAAAGAGCTCACTTTGGAGTATGATCTTCTTAAGAAGGAAAATGTGGATATCTCTTTGAGGTTAAAGCAAGATGaagcacaacacatcatgctaCAAAATGAACATTCAGCTTCTTTAGTTACAATACAACAACTTGAATCCCAAGTAGAgagattagaaaaaaaactaaaggtgCAGGAAGATGAATTTTCAGCATCCCTGGTCTGCATCAAGGAACTTGAAGATCAAATCAAGTCTTTGGAGAAAGAACTGAAAATACAGGCAGAGAAATTTGAAGAAGATCTCCATGCTATGCAATGTGCAAAAACTGAGCAGGAAGAACGGGTCATCCAGGCAGAAGAGTCCTTGAGAAAGACAAGACACAATAATGCTGTCGCATCTGAGCGCTTTCAGGAGGAATATAGATTGCTTTCTGTTGAAATGGCACAAAAAGTTGAGGAGAATGAAAAGATGACCATGAAAGCAGTTGCAGAAGCTGATGAATTGAGGCACCAGAACAAACTTATAGAAGAAATGCTCCATAAATGCAATCAAGAGCTCAGGCTTATCACAGATCAGAATGAATTGAAAATGCAAGAGCTTTTGGACCAAATAGATTCGAAAGCAAAAACAATAGAACAGATGTCAGAAGAACTAGAAGTTAAGTCTAAACAACTTGAGGATGCACAAAGGCACAGGGATGAAAAGGATGCTTCATTTTCAAAGCAAATTCAAATACTCAGatctcaaattaaaatactgATGGCAGAGGGTGCATTGTCTGAAACCAAGCTAACACAGAACATGGCTGAGATCGCAAGGGAAGATGCAAAAATAGCCCAGAAAGGACAACCACTTATGACACCAAATGATGAGGAGATGATTGGCACCCTACTGTCAGAAGTAGAAACCTTTAAGAACCAGCACAACGAAATAAAACACAGTTTGCACAGAGAACAAgtggagaaagaaaatatgaagaaaCAGATATCTCAGTTAGAAGGAGAGCTGAAGAAGAAGGAAGCAGAGTTAAGTGCTATGGAAAAGAAACTCAAGAATAACAAAGGACGAGCTGCAGTTACACATATGAATTTGACTTCCAGAGACAATGAGTGTGTGCCTCCTTCTGCTAAGGCAAATATCAAGAAGTCAAAATCTGAAATGCATAAGGGAGCGGATGCTGCAAGTACTGCTGTTGGCAAGTCTGCAGGAGGAACAATAGGCAAGTCAGCTGAGAACAAAGTTTGTCTAGCTCCCAGAAgTGAGGGTAAAACTTGCTCGGTAAATAATCACAATGGTGGTGAGTGCCATACAAATGAATTGTTGAATGAAGTTGCACTGCTAAAGGAAAGGAACAAGATTATGGAAAGCGACCTGAAAGACATGGAAGAAAGATATTCAGAGATTAGTCTGAAATTTGCAGAGGTAGAGGGAGAAAGACAACAGCTTGTTATGGCTCTACGCAATCTCAAGAATGGTAAGAAGAACTAG 2844 0.3815 MFKSWSKKNKIKAVFKLEFQATQVPKMKKSAIMVSLVPDDVGKPTVKLEKTAVQDGTCSWENPIFESVKLVRDAKSGKIHEKIYHFIVSTGSSKSGFLGEASIDFADFVAETEPITISLPLKFANSGIVLHVTIQNVEGYIAERNGEDNGAEGLCSDGSLRHQLSYGSTDHESYNVENGHMARTRSEYSEQDASNGISPGVASWEDPYNFRQNSISSKGNVRATATETQVHKRSNTNWSIGSASDGSLGDWTNSLEDNLPRERLQEPSDNATERLKSEISSLKRQAELSELELQSLRKQIEKESNRGQNLSRQIISLREERDSFKTKYEQLKSQQNFNNEPKTISKTFKSEIEDTRLQLEAIKEELVYEKELSANLQLQLRKTQNSNSELLLAVTDLEAMLEEKNKEILDLSTNIKSQKTTKEHDDATKLDLLRQKVADQNDEIDNYYQQREELSEQIKELTLEYDLLKKENVDISLRLKQDEAQHIMLQNEHSASLVTIQQLESQVERLEKKLKVQEDEFSASLVCIKELEDQIKSLEKELKIQAEKFEEDLHAMQCAKTEQEERVIQAEESLRKTRHNNAVASERFQEEYRLLSVEMAQKVEENEKMTMKAVAEADELRHQNKLIEEMLHKCNQELRLITDQNELKMQELLDQIDSKAKTIEQMSEELEVKSKQLEDAQRHRDEKDASFSKQIQILRSQIKILMAEGALSETKLTQNMAEIAREDAKIAQKGQPLMTPNDEEMIGTLLSEVETFKNQHNEIKHSLHREQVEKENMKKQISQLEGELKKKEAELSAMEKKLKNNKGRAAVTHMNLTSRDNECVPPSAKANIKKSKSEMHKGADAASTAVGKSAGGTIGKSAENKVCLAPRSEGKTCSVNNHNGGECHTNELLNEVALLKERNKIMESDLKDMEERYSEISLKFAEVEGERQQLVMALRNLKNGKKN 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0775 947 Coils Coil 767 808 - -
Ssu7g0775 947 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Ssu7g0775 947 MobiDBLite consensus disorder prediction 207 254 - -
Ssu7g0775 947 Coils Coil 528 580 - -
Ssu7g0775 947 Coils Coil 617 637 - -
Ssu7g0775 947 Coils Coil 889 930 - -
Ssu7g0775 947 Coils Coil 649 683 - -
Ssu7g0775 947 MobiDBLite consensus disorder prediction 184 255 - -
Ssu7g0775 947 Coils Coil 493 520 - -
Ssu7g0775 947 Coils Coil 272 334 - -
Ssu7g0775 947 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 947 - -
Ssu7g0775 947 Coils Coil 387 421 - -
Ssu7g0775 947 Coils Coil 430 478 - -
Ssu7g0775 947 Coils Coil 345 365 - -
Ssu7g0775 947 MobiDBLite consensus disorder prediction 184 198 - -
Ssu7g0775 947 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Ssu7g0775 947 PANTHER BNAC08G20130D PROTEIN 1 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0775 Ssu-Chr7 15636279 15641106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0775 - - gmx:100806603 1505.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0775 7 15636279 15641106 Ssu2g2847 2 89532446 89537430 ECH
Ssu7g0775 7 15636279 15641106 Ssu7g0775 7 15636279 15641106 ECH
Ssu7g0775 7 15636279 15641106 Ssu7g0775 7 15636279 15641106 PCT