Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3037 ATGTTCAGATGGAGGAGTGAGAGACACAGGGTCAAAGCTGTTTTCAAACTCCACTTCCATGTCACTCAGATGGTGCAATCTGGGGTGGATGCTTTGGTGCTGTCTATAGTTCCAGGGGACATCGGAAAGGTGACTACGAGATTAGAGAAAGCTGCAGTTCGTGGTGGAGTTTGCAGATGGGAGAATCCTGTCTATGAAACAATCAAGTTTGTTCAGGAGCCTAAGACTGGGAAGTTCAGTGAGAGAGTATATCATTTTGTGGTTTCAACGGGCTTATCCAAAGCTAACTCCATTGGGGAAGTTTCTATAGACTTTGCTGAGTATGCTGAGGCCACAAAGCTCTCCACCGTCTCTCTTCCCATCAGGAATTCTCATTGTGATGCTGTCTTGCATGTATCAATCCAGAGACTACAAGAAAATAATGTTAAGAGAGAGGAAGAGGATTGTGAAGATGCCAAACTAAAACCCAATGATAGAAGTTTGAGGACCTACTTAAGCAATGGAGAGATAGATGCAAGCTCTAAAAGTGATTCTTCTGAAGATGTGTCTGCCAAAGCAAACACCAATGGACCTGAATTGAGTGCTGATTGTAGGACATCTAGTGGATCTGACATTACATTGTCAAGTTCTGATGGCAGCTCAGGACTTGATACTCCCGAGAACTTGGACTAA 672 0.4375 MFRWRSERHRVKAVFKLHFHVTQMVQSGVDALVLSIVPGDIGKVTTRLEKAAVRGGVCRWENPVYETIKFVQEPKTGKFSERVYHFVVSTGLSKANSIGEVSIDFAEYAEATKLSTVSLPIRNSHCDAVLHVSIQRLQENNVKREEEDCEDAKLKPNDRSLRTYLSNGEIDASSKSDSSEDVSAKANTNGPELSADCRTSSGSDITLSSSDGSSGLDTPENLD 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3037 223 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 1 221 - -
Ssu5g3037 223 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Ssu5g3037 223 MobiDBLite consensus disorder prediction 167 223 - -
Ssu5g3037 223 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 9 139 IPR019448 -
Ssu5g3037 223 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 221 - -
Ssu5g3037 223 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3037 Ssu-Chr5 77792006 77793486 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3037 - - gmx:100819574 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2847 2 89532446 89537430 Ssu5g3037 5 77792006 77793486 PCT