Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1776 ATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGTTGCACGAGCAAGATTGTCTCGAAGGAACAGATGGCAGGAGAAGCATACGAGGAAGCCATCGCAAGTCTGACCAAGCTTGTCAGTGAGAAAGCTGACCTCGGTGGTGTCGCCGCCGCAAAGATCAAGGACCTGACGGCGGAGCTTGATGCGGCCGGTTCAAAGCCGTTTAACCCGGAGGAGAGGATCAGAACCGGTTTCATCCACTTTAAGAATGAGAAATTCGAGAAGAATCCTGATCTATATAGCCAACTTGCCAAGGGCCAGAGCCCAAAGTTTATGGTATTTGCATGCTCAGACTCGAGAGTTTGTCCATCTCATATTCTGGATTTCCAACCGGGTGAAGCCTTTGTGGTCCGAAACATTGCCAACATGGTTCCACCATATGACAAGACGAAGTATTCAGGAGCAGGGGCGGCCATTGAATATGCAGTCTTGCACTTAAAGGTGGAGAATATTATAGTTATTGGACACAGCTGCTGTGGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAGTGAATTCATAGAGCAATGGGTCCAAATATGTACTCCAGCAAAGTCCAAGGTTAAAGCAAAAACAAGTGACTTAAGTTTCTCGGAGCAGTGTACTAACTGTGAGAAGGAAGCTGTGAATGTATCGCTTGGAAACTTATTAACTTATCCATTTGTTAGAGATGGGGTTGTGAATAAAACTCTTGCTTTGAAAGGAGCACATTACGATTTCGTTAATGGCACTTTTGAGCTGTGGGATTTGAACTTCAAACTTTTGCCCACTGTATCCGTTTAA 837 0.4552 MAGALKKCMMLCCTSKIVSKEQMAGEAYEEAIASLTKLVSEKADLGGVAAAKIKDLTAELDAAGSKPFNPEERIRTGFIHFKNEKFEKNPDLYSQLAKGQSPKFMVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDKTKYSGAGAAIEYAVLHLKVENIIVIGHSCCGGIKGLMSIPDDGTTASEFIEQWVQICTPAKSKVKAKTSDLSFSEQCTNCEKEAVNVSLGNLLTYPFVRDGVVNKTLALKGAHYDFVNGTFELWDLNFKLLPTVSV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1776 278 CDD beta_CA_cladeB 77 266 IPR045066 GO:0004089|GO:0008270
Ssu2g1776 278 PANTHER CARBONIC ANHYDRASE 23 278 IPR001765 GO:0004089|GO:0008270
Ssu2g1776 278 SUPERFAMILY beta-carbonic anhydrase, cab 72 275 IPR036874 GO:0004089|GO:0008270
Ssu2g1776 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 153 173 IPR015892 GO:0004089|GO:0008270|GO:0015976
Ssu2g1776 278 Gene3D Carbonic anhydrase 63 278 IPR036874 GO:0004089|GO:0008270
Ssu2g1776 278 Pfam Carbonic anhydrase 105 262 IPR001765 GO:0004089|GO:0008270
Ssu2g1776 278 PANTHER CARBONIC ANHYDRASE 23 278 - -
Ssu2g1776 278 SMART Pro_CA_2 97 267 IPR001765 GO:0004089|GO:0008270
Ssu2g1776 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 109 116 IPR015892 GO:0004089|GO:0008270|GO:0015976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1776 Ssu-Chr2 68480550 68492175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1776 K01673 - gmx:100803945 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1776 2 68480550 68492175 Ssu2g1776 2 68480550 68492175 ECH
Ssu2g1776 2 68480550 68492175 Ssu8g2471 8 64119399 64123297 ECH
Ssu2g1776 2 68480550 68492175 Ssu5g1071 5 33843260 33849884 PCT