Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3730 ATGCCCTGTGAAAGTAAGATGAAGCTCGTGTTTGCAAACGTGCTACTTGTGTGCCTTGTCCTTAGCTCCTCCTTCTTGGAAATCTCAGTGGCTGGTTCTGCTTTCTGTGACTCAAAGTGCGCACAGAGGTGCGCCAAAGCTGGGGTTCAGGACAGATGCTTGAAGTTCTGCGGGATCTGCTGTGAGAAGTGCAAGTGTGTACCATCTGGGACTTATGGAAACAAGTACGAGTGTCCTTGCTACAGGGACTTGAAGAACTCCAAGGGCAAGGACAAATGCCCTTGA 285 0.4982 MPCESKMKLVFANVLLVCLVLSSSFLEISVAGSAFCDSKCAQRCAKAGVQDRCLKFCGICCEKCKCVPSGTYGNKYECPCYRDLKNSKGKDKCP 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3730 94 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 7 94 - -
Ssu1g3730 94 Pfam Gibberellin regulated protein 35 94 IPR003854 -
Ssu1g3730 94 PANTHER GIBBERELLIN REGULATED PROTEIN 7 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3730 Ssu-Chr1 93664760 93665185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3730 - - gmx:100306110 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3730 1 93664760 93665185 Ssu7g0490 7 9141528 9141920 ECH
Ssu1g3730 1 93664760 93665185 Ssu1g3730 1 93664760 93665185 ECH
Ssu5g0299 5 6389929 6391016 Ssu1g3730 1 93664760 93665185 PCT