Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0490 ATGAAGCTTCTCTTTGCCACCCTACTATTGTGTTCTCTTCTTCTAAGCTCCTCTTTCTTTGAGCCAGCCATTGCGTATGAAGATTCGTCCTATTGCAGCAACAAGTGTTCGGACAGATGCTCAGCGGCAGGGGTTAGGGATAGGTGCCTGAAGTACTGTGGAATATGCTGTGCAGAGTGCAAATGTGTTCCTTCTGGGACGTATGGGAACAAGCACGAATGCCCTTGCTACAGGGACAAGCTCAACAAGAAGGGCAAGCCCAAATGCCCTTGA 273 0.4908 MKLLFATLLLCSLLLSSSFFEPAIAYEDSSYCSNKCSDRCSAAGVRDRCLKYCGICCAECKCVPSGTYGNKHECPCYRDKLNKKGKPKCP 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0490 90 PANTHER PEAMACLEIN-LIKE 1 90 - -
Ssu7g0490 90 Pfam Gibberellin regulated protein 32 90 IPR003854 -
Ssu7g0490 90 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0490 Ssu-Chr7 9141528 9141920 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0490 - - gmx:100813571 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0490 7 9141528 9141920 Ssu7g0490 7 9141528 9141920 ECH
Ssu1g3730 1 93664760 93665185 Ssu7g0490 7 9141528 9141920 ECH