Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0299 ATGAAGCTAGCATTTGCAGCTGTGCTACTTATGTGCCTTGTCCTCAGCTCCTCTTTGTTTGAAGTGTCAATGGCCCGTTCCGCTTTATGTTCCTCCAAGTGCGGGAAGAGGTGCGCTAAAGCTGGGATGAAGGACAGGTGCATGAAGTTCTGCGGGATCTGCTGCAGCAAGTGCAAGTGTGTGCCATCCGGGACTTATGGAAACAAGCACGAGTGCCCTTGCTACAGGGACTTGAAGAATTCCAAGGGCAAGCCCAAATgcccttaa 267 0.4981 MKLAFAAVLLMCLVLSSSLFEVSMARSALCSSKCGKRCAKAGMKDRCMKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKPKCP 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0299 88 PANTHER GIBBERELLIN REGULATED PROTEIN 1 88 - -
Ssu5g0299 88 Pfam Gibberellin regulated protein 30 88 IPR003854 -
Ssu5g0299 88 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0299 Ssu-Chr5 6389929 6391016 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0299 - - gmx:100500113 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0299 5 6389929 6391016 Ssu1g3730 1 93664760 93665185 PCT