Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2565 ATGATTAGATATGAACTGAGTCGCGTGTCAGCGATTCTCTTTGTTGCCATGGCTAGCAGAAAATTACAATGCCGGTTGGAAGCTAGATCAGGGCTTCTTCAGGCATGGTTCAGGCCTATGCTGTTGGACTTTGGTTGGCTTCAGAGATGCAGAAGAGGGCTTGATATAAAGGTCTTGCAAGAGGCTATGGGTCAGACACTTCTTACTCTACCTCTAAATCAACAATACATGCTCTTCATGGAATGGTTTCGGCACTTCTCAAGCCATGGCACTGAATGTCCAAATCTAAGCAAGGCATTCCAAATTTGGTGGCGCAGATCGTTCTTAAGAGGCTCTGAAACTTATGCCATTGAGTCAAGATAA 363 0.4463 MIRYELSRVSAILFVAMASRKLQCRLEARSGLLQAWFRPMLLDFGWLQRCRRGLDIKVLQEAMGQTLLTLPLNQQYMLFMEWFRHFSSHGTECPNLSKAFQIWWRRSFLRGSETYAIESR 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2565 120 PANTHER OS04G0278000 PROTEIN 1 120 - -
Ssu1g2565 120 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 1 120 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2565 Ssu-Chr1 70250710 70251072 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2565 - - gmx:100806876 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2859 5 74907951 74910275 Ssu1g2565 1 70250710 70251072 PCT
Ssu5g3083 5 78508473 78510631 Ssu1g2565 1 70250710 70251072 PCT