Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2859 ATGAACCGGTGGTCCCGCCGGGGCCGTAAGCCTTGCCGGCGGGCATGGTGCTGCTCGTTCGCCATCCCTCCGTCAAGCCCGGAAGTCACCTCAATCCCTCACTCCAAATCGCGCCACAATCACAAACCCGAACCCTTCTCGAAGCCCAGCGTTTCGGTCCCAAACTCACCTCAGAGCGCCAAATCCGGGTTCCCCATCGTGGGTCGGATCGACCCGCGCCGGATCTTGTCACCGGGAAGAGTCTCTCCCATCGACTCCGATCCCGCCCCCGCCGAGTCGCAACTCCGATCCCGCAGCTTCCGCGCTCCCTCCCCGCCACCGCCAGAGGCGGCGGCGGCGGAGAGTGCGGCTGCGCTGGACGTGAGGCTGAACCTGCGAGGGAGGAACGGGGGGAGcatggtggtggaggtggaCTCGGAGGTTCTGGGGGCGAACTCGGAGGTGTTTGCGGGTTTGATAGCTGATTGCAAGAGAGGTGGGGGTGGAGCCACCATGGAGGTGGACAACTTGGGTGTGTTCACAGACACCATTGAGCTTATGTTTGAAGACACGGATCGCATCACCAAGAGGCTCGTCAACATTGGTGTTTGTCGGTCCATAGACATTTTGGAGGTTTCAGCAGGAATTATGTTCACTAAGGGCGTTCAGTGCTGTTTGAAGTACCTTGAGGCTGTTCCTTGGActgaggaggaagaagagaaattaaGGAGCCTGTTCACAAGATTTGAGTTCGATGATGCAACAGCTAAAGACATCTTGGGAAGACTGTACTTGCATGACTCGGTAGATTACCGGCCAAATGTGGCCCAGCAACTTGTTTGGTCTATCAGCACTTGTGAGGATGCAAATGCCAGAAATGAAATGAAGTCACTAGTCAAGGGTCTTCTTTGCAAAAGCTCTGTGTATGAGAAGAACCATCTTGAGCTTAGCAAGGAGGATCTATATGCCGTTTGCCACTCTTGTCTGAGTTCACTTATCAGTCTCTTTGAGGAGGCATCTGACACCATCCCTCCTGAAAGGTTACCAAAGAAAGACGTGAGCAAGCCTCTGATTGAGCGCATCGCAAGACAGGTTGACAACATCAACTGGTTGCTGGAAATTATGCTTGATGGGCAAATGGCAGAGGACTTTGTGGATATATGGGCGCATCAGCAACAACTTCTTAAAATGCATGACACTGCATCCCCTATGATCAGATATGAACTCAGTAGAGTGTCAGCAATCCTATTTGTTGCTATGGGTACAAGAAAACTACAATGCCCTTTGGAAGCTAGATCAGGGCTTCTCCAGGCATGGTTTGGACCTATGCTGTTGGACTTTGGTTGGCTGCAGAGATGCAGAAAAGGGCTTGATATGAAGGCCTTGGAAGAGGCTATGGGGCAGACACTTCTTACTTTACCTTTAAAGCAGCAGTATGTGCTGTTTATGGAATGGTTTCGGCATTTCTCAAGGCATGGCACTGAATGCCCAAATATGAGCAAGGCATTCCAAATTTGGTGGCGCCGATCGTTTTTAAGAGGTTCTGAGACTTATGCCGTTGAATCAAGATAA 1551 0.5048 MNRWSRRGRKPCRRAWCCSFAIPPSSPEVTSIPHSKSRHNHKPEPFSKPSVSVPNSPQSAKSGFPIVGRIDPRRILSPGRVSPIDSDPAPAESQLRSRSFRAPSPPPPEAAAAESAAALDVRLNLRGRNGGSMVVEVDSEVLGANSEVFAGLIADCKRGGGGATMEVDNLGVFTDTIELMFEDTDRITKRLVNIGVCRSIDILEVSAGIMFTKGVQCCLKYLEAVPWTEEEEEKLRSLFTRFEFDDATAKDILGRLYLHDSVDYRPNVAQQLVWSISTCEDANARNEMKSLVKGLLCKSSVYEKNHLELSKEDLYAVCHSCLSSLISLFEEASDTIPPERLPKKDVSKPLIERIARQVDNINWLLEIMLDGQMAEDFVDIWAHQQQLLKMHDTASPMIRYELSRVSAILFVAMGTRKLQCPLEARSGLLQAWFGPMLLDFGWLQRCRKGLDMKALEEAMGQTLLTLPLKQQYVLFMEWFRHFSRHGTECPNMSKAFQIWWRRSFLRGSETYAVESR 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2859 516 PANTHER OS04G0278000 PROTEIN 6 516 - -
Ssu5g2859 516 MobiDBLite consensus disorder prediction 22 115 - -
Ssu5g2859 516 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 6 516 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2859 Ssu-Chr5 74907951 74910275 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2859 - - gmx:100786004 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2859 5 74907951 74910275 Ssu5g2859 5 74907951 74910275 ECH
Ssu5g2859 5 74907951 74910275 Ssu1g2565 1 70250710 70251072 PCT