Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2448 ATGCACCTGCAGGCACCCACACTCAGGCTTAACACTGCAAGGTCCCCACCTTCATTAGCCCCAACTGGCAATGCTGGCCTGCAACCACAGTTCAACCCTTTTGCTTTAAAGTCATCTTTCTTCTCTGGTTCCCTTAACCTCTTACTTCGTCCAAATCAACAGCTTCTTACTTCTGGTGCTCCCAGGATTTCCATGCGTGTGGCTTCCAAGCAAGCCTATATCTTTTGTGGTGCTCCAAAACGAAGGTTTAGGCCCTACGCTCCAGCTGTTGCAAGAAACGCAAATAATACAGATGTTAGAAAGGCACGAAAATCCGAAATTCAGAGAGAAGAAGCAATCGGGAACGCACTTCCTATTGCAGCTGCCGTGGGAATTGCAGTGCTTGCTGGATTATACTTCTATCTGAACAGCAAATTTTAG 420 0.469 MHLQAPTLRLNTARSPPSLAPTGNAGLQPQFNPFALKSSFFSGSLNLLLRPNQQLLTSGAPRISMRVASKQAYIFCGAPKRRFRPYAPAVARNANNTDVRKARKSEIQREEAIGNALPIAAAVGIAVLAGLYFYLNSKF 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2448 139 MobiDBLite consensus disorder prediction 1 24 - -
Ssu1g2448 139 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 76 138 - -
Ssu1g2448 139 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 1 74 - -
Ssu1g2448 139 MobiDBLite consensus disorder prediction 8 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2448 Ssu-Chr1 68139206 68140111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2448 - - gmx:100500575 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2448 1 68139206 68140111 Ssu1g2448 1 68139206 68140111 ECH
Ssu5g2879 5 75282789 75284697 Ssu1g2448 1 68139206 68140111 PCT
Ssu5g2952 5 76242025 76243285 Ssu1g2448 1 68139206 68140111 PCT