Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2879 ATGGTgtgcggtggtggtggtaatgttgACAATGATGGCGGCGACGTCGGTAGTTGTGTTGGtggcaacaataataatagtggtGACGATGGTGACAACGACGACAACAATAATGGTAGTATCAGTGGTAGTGGTAACAATAGCGACGATAGTGGTGGAAGCAGCTCAATGGTGGTGGTCatGCTTCCCATATTTGATCATTATTTCTACACACAAATGCCTGTGTCTGATCCTAGTTCTGGGCGCACGTTCATATGGATCATAAGTGGTCTTTTGTTCATCTCTATAGTGGCAGGAGGGGCATGTCTTGTGGCATACTTGCTCCTTCCTGAATCAGAAACATCATCATCTTGGATACCCCAAATTGGGGTGGCACTGATTTGCCTACCATGGCTGTTTTGGTTGCTCACCTTCTTGTACAGAATCCTCTCAAGGATTTTTGGATGTAGAGTTAGAATTGGCGGAGATGGAAGTGGAGGAAATTTGGCTGCTACGAATGCTGATGTGGAGGTTGCATCTCATGCAAAAGATGGCGAGTTAAATAGGGCATCATCTGTTGCTTCACACGAGAGTGAAATGGCTCTGGCAAAATCTATGGCCTCATGA 606 0.4241 MVCGGGGNVDNDGGDVGSCVGGNNNNSGDDGDNDDNNNGSISGSGNNSDDSGGSSSMVVVMLPIFDHYFYTQMPVSDPSSGRTFIWIISGLLFISIVAGGACLVAYLLLPESETSSSWIPQIGVALICLPWLFWLLTFLYRILSRIFGCRVRIGGDGSGGNLAATNADVEVASHAKDGELNRASSVASHESEMALAKSMAS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2879 201 PANTHER MEMBRANE LIPOPROTEIN-RELATED 73 201 - -
Ssu5g2879 201 MobiDBLite consensus disorder prediction 18 53 - -
Ssu5g2879 201 PANTHER MEMBRANE LIPOPROTEIN-RELATED 73 201 - -
Ssu5g2879 201 MobiDBLite consensus disorder prediction 17 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2879 Ssu-Chr5 75282789 75284697 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2879 - - gmx:100778757 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2879 5 75282789 75284697 Ssu1g2448 1 68139206 68140111 PCT