Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1783 ATGGTGTACTCGAAGGCACCCACCGCATACTACTCGACGCTCCACGATTCAATCACCTCTCTGTGCAAGACCATTCTTCCCTTGAGCCTCAAGAAACGGTGTCTGGTTTCCGCAGAGCACAGGCTGCGGCAGCTGAAATCCGACAACCTCAAATGGCAGCAAGACTCTCTCCATCAGATGCTCAACTTGATGGGTCTTCACAAAGACGACATCCTCACTGAAGCTGAGGTTTCAGCTTTCAGGACCCATTTGCTTGACACCCTTCTGGCTTCACCACCTCCACAGCAGGATCATCCCCTCATCATCAAAGATAAGCTTATGTTCTTACAGGAACTTCTTAATGCAAAATGCATTTCTGAAGGGGAGTACCACTCTTCAAGAAGGCCTTTGCTAGTGAGACTGGCAGTTCAAGGAGGTGAGATTGAAGGCAGGGACGTGATCATTGCAGGGTCAAAAGACATGAAACAAAATTCAGAGGAACAATGGTCGGAGATTGACTTGAAGGATGAGCAGTGCTTGGTGAACAAAGAGAACTCAAATTCCAAGAAGACATTAAAGCAGGCAAGGAAGCAGGTTGTTAAAGGAGCAACCTCGGTTTTTAGCTTTGGCTCTTCATACAAACCTGGGAAAAGCTCGATGGAGAAGAGCATATTTGATTCTCCAACTTTACACATGCACTCAGCACAATCAAGAATCCCTTCTCCCTCTATCTATACCCAAAGTGAATTGAGGCATTCTAAGGAAAACAACCCCTTCTGGGATGGGCCAGAGAAGTTGAAGAGGAAACCATTTAGAGCTCTATTTCATAGGGATAAGAATAAGAGAGAAGGGCACGGTGGTGGAGATCATCATGGTCTTGAAGCAGAGAAATCAGCAAAAAAACAATGGGGGATTGATGGGTTGATGAAATGGAAGAGAAGTGACTCAGATGATGACACAGTTCCTTTGTCTCTAAATGAGAAGTCTGATAGTGAGGCCTACTTGGCTTCCTGTCAGCTTTCTTCAAAGGCATATGGTGAGGTATCAATGATGAACAAGTTGCATTCTGATGTATCACCATCTGATTTTTCCGTGGATAATAAGGTTTCGGGGGACAAGATAAAGAAGGATGTGTCAAGAATCCCGACAGAAATGAGGAGCACAAACACAAATCTCAACTTCTCGAATGATCAGAAGCAAGCAAATTCTACCAAACTTCCAGAGGACAAGACCgagttaaaaaattactttccgaAACCACGGTGTGACCACCGGTATGGTGATGTTGTGTTGGATGAGGTGAAGAAAGACCACCGTGTTGGAGAAATGGAAAATATGCACGACGATGCAGAAGAGAAACATGAAAACTCAATGGGGTGGACAACATTTGAAGACGACGAAAACCTTCACCCAAATCTTTCTGTTCTTCAAGATAAATCATTGCGCAGCAGTAGCATCAATCCATTTTCTCATGGTTACGCTTAG 1464 0.4399 MVYSKAPTAYYSTLHDSITSLCKTILPLSLKKRCLVSAEHRLRQLKSDNLKWQQDSLHQMLNLMGLHKDDILTEAEVSAFRTHLLDTLLASPPPQQDHPLIIKDKLMFLQELLNAKCISEGEYHSSRRPLLVRLAVQGGEIEGRDVIIAGSKDMKQNSEEQWSEIDLKDEQCLVNKENSNSKKTLKQARKQVVKGATSVFSFGSSYKPGKSSMEKSIFDSPTLHMHSAQSRIPSPSIYTQSELRHSKENNPFWDGPEKLKRKPFRALFHRDKNKREGHGGGDHHGLEAEKSAKKQWGIDGLMKWKRSDSDDDTVPLSLNEKSDSEAYLASCQLSSKAYGEVSMMNKLHSDVSPSDFSVDNKVSGDKIKKDVSRIPTEMRSTNTNLNFSNDQKQANSTKLPEDKTELKNYFPKPRCDHRYGDVVLDEVKKDHRVGEMENMHDDAEEKHENSMGWTTFEDDENLHPNLSVLQDKSLRSSSINPFSHGYA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1783 487 MobiDBLite consensus disorder prediction 380 395 - -
Ssu1g1783 487 Coils Coil 35 55 - -
Ssu1g1783 487 PANTHER OS09G0556800 PROTEIN 1 473 - -
Ssu1g1783 487 MobiDBLite consensus disorder prediction 271 290 - -
Ssu1g1783 487 MobiDBLite consensus disorder prediction 380 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1783 Ssu-Chr1 44462890 44465541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1783 - - gmx:100814752 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0718 6 11328092 11341436 Ssu1g1783 1 44462890 44465541 PCT
Ssu6g0924 6 14949737 14951936 Ssu1g1783 1 44462890 44465541 PCT