Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0924 ATGGTGTACTCCTACTACACCCCCACGTACTACTCAACCCTCCATGACTCAATCACCTCACTGTGCAAGACCATTCTTCCTTTCAGCTTCAAGAAACGACCCTTACCTGCGGCAGAACATAAATTGTCAAAGCTGCAATCGGATAACCTTAAATGGCAGCAAGACTCTTTTCACCAGGTGTTGAACTTGATGGGTCTCCACAAAGAGGGCATCTTGGCTGAATCTGAGGTTTCAGCCTTCAGAACTCACTTGCTAGACACCCTCATCGCTTCACCTCCAGAACAAGAACACCCCGTTATATTAAGAGACAAGCTTCTGTTTCTCCAGGAACTTCTTTATGCCAAGTGCATTTCTGAAGAAGAGTACCATTCTTCTAAGAGGCCATTGCTCCAGAGACTGGCGGCTCAAGGGGCTCAGATTGAAGCTAGGGATGTGATCGTGGCAAGGCATAAGGACCCAAAAGAGAATTCAGAAGAAGAGTGGTCGGTGATTGACTTGAAGGATGAGAAATGCTCGGTGAAGAAAGAGAATTCGAGTAGTAAGAGCAGGTCCAATCAGGGATCAGCCATGAAGCAGATTAAAGGAGCAGCCTCGGTTTTTGGCTTTGTCAAAGCTGGGAAAAATGGGGCAGAAAAGAGCATTTTTGATTCACCAGCCCAACCAAAATTCCCTTCCTCAAATGAATTGAAGGAAAACCCCTTCTGGGATGCTCAGTCAAAGGGCAAACAAAGTGAAGGAAGGTCAATTCTTATGGAGGAAAGTGGGCCTCCAGAACCAATAAAGGAGAGTAGTGGTTTGGACAAGTTGAAGAGGAAACCATTTAGGACTTTGTTTCATAAGGAGCAAAGAGAGGGACATGATGGTGGGGGTGGTGGTGGTCCTGAGCAAGATCAAAAATCAGGGAAATCAGCTAAAAAGCAATGGGGGTTTGACGGGTTcaaaaaatggaagagaaatgAGTCAGAAGATGAGACAGCTCCTTTTTCTCTTAATGAGAGGTCTGATAGTGAGGCCTATTCAGCTTCCTTTGCAAAGGCACTTGGGGAGGGACCCGACACCAAGTTAATAAAGAAGAAGTTGCATTCTGATGGTTCCCCATCTGATTTTTTCATAGATAAGGTTTTGGGAGACAAGATAAAGAAGGAGTTGTCAAGAATCCAGACAGAACTGAGCAGCACAAACCCAAATCTTAAATTTTCGAATGATCAGATTGAAGCAATTTCTACCAGAATTCCAGTGGACAAGGCTGAGTTGAAAAATTACTTTCCCAAATCATGGTGTGACCGATACGGTGATGTTGTGCTGGATGTGGTGAAGAAAGAATTCAAAGACCATGTTGCCGAAATGGAGAACATGCGCAACATTGCTAGAGAAAAACATAGCCACTCTAGGCGGTGGACAACAACATTTGACGATGACGAAAACATTCATCCAAATCTTTTTGGTCATCGTGATAATTCAGTTCGCAGCAGTAACATCAATCCATTTTCTCATGGTTACGCTTAG 1506 0.4369 MVYSYYTPTYYSTLHDSITSLCKTILPFSFKKRPLPAAEHKLSKLQSDNLKWQQDSFHQVLNLMGLHKEGILAESEVSAFRTHLLDTLIASPPEQEHPVILRDKLLFLQELLYAKCISEEEYHSSKRPLLQRLAAQGAQIEARDVIVARHKDPKENSEEEWSVIDLKDEKCSVKKENSSSKSRSNQGSAMKQIKGAASVFGFVKAGKNGAEKSIFDSPAQPKFPSSNELKENPFWDAQSKGKQSEGRSILMEESGPPEPIKESSGLDKLKRKPFRTLFHKEQREGHDGGGGGGPEQDQKSGKSAKKQWGFDGFKKWKRNESEDETAPFSLNERSDSEAYSASFAKALGEGPDTKLIKKKLHSDGSPSDFFIDKVLGDKIKKELSRIQTELSSTNPNLKFSNDQIEAISTRIPVDKAELKNYFPKSWCDRYGDVVLDVVKKEFKDHVAEMENMRNIAREKHSHSRRWTTTFDDDENIHPNLFGHRDNSVRSSNINPFSHGYA 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0924 501 Coils Coil 439 459 - -
Ssu6g0924 501 MobiDBLite consensus disorder prediction 213 335 - -
Ssu6g0924 501 MobiDBLite consensus disorder prediction 219 245 - -
Ssu6g0924 501 PANTHER OS09G0556800 PROTEIN 1 492 - -
Ssu6g0924 501 MobiDBLite consensus disorder prediction 299 330 - -
Ssu6g0924 501 MobiDBLite consensus disorder prediction 263 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0924 Ssu-Chr6 14949737 14951936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0924 - - gmx:100819771 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0924 6 14949737 14951936 Ssu6g0924 6 14949737 14951936 ECH
Ssu6g0924 6 14949737 14951936 Ssu1g1783 1 44462890 44465541 PCT