Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1696 ATGTGGTGGCCTCGACATGATTCATCACACTTCACCGACCGACGCCACTGTATCACACGGCTGCGATTCATCCCCAGATCCAATCTGAGCAGATCCAAGTGTCCAAGTTTGGATTTTGCTCTTCTGGGTCGGTTCTTTGCCTCTTCCTCACTGGTCGTCTTGGTTCTTGAACCGGAAGCAATTAAAATGGCCCAGGAGACTTTCCTTTTCACATCTGAATCAGTGAACGAGGGGCACCCTGACAAGCTGTGCGACCAGATCTCTGATGCTGTGCTTGATGCGTGCTTGGAGCAGGACCCAGACAGCAAGGTTGCCTGTGAAACCTGCACCAAGACCAACATGGTGATGGTTTTTGGCGAGATCACAACCAAGGCCAACGTGGACTACGAGAAGATTGTGCGTGACACTTGCAGGAACATAGGGTTTGTTTCTGATGATGTTGGTCTTGATGCCGACAACTGCAAGGTCCTTGTCAACATTGAGCAACAAAGCCCTGATATTGCTCAGGGTGTGCACGGCCACCTCACAAAGAGGCCTGAGGAGATTGGTGCCGGTGACCAGGGTCACATGTTTGGCTATGCCACTGATGAGACCCCTGAGCTTATGCCCTTGAGCCATGTCCTTGCCACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGCACGTGCCCTTGGCTGAGGCCTGATGGCAAGACCCAAGTCACTGTTGAGTACTACAATGACAAGGGTGCCATGGTTCCCATCCGTGTCCACACTGTGCTCATCTCCACACAGCATGATGAGACCGTCACAAATGATGAGATTGCGGCTGACCTTAAAGAGCATGTGATCAAGCCTGTGATTCCTGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTGAACCCTTCTGGCAGGTTTGTCATTGGGGGTCCCCATGGTGATGCTGGCCTCACTGGCCGCAAGATCATCATTGACACCTATGGAGGATGGGGTGCACATGGTGGTGGTGCCTTCTCAGGGAAGGACCCTACCAAGGTTGATAGGAGTGGAGCTTACATTGTGAGACAGGCTGCCAAGAGCATTGTTGCCGGTGGACTTGCCAGGAGGGCAATTGTGCAAGTGTCCTATGCCATTGGTGTGCCTGAGCCTTTGTCTGTGTTTGTGGACACATATGGCACTGGGAAGATCCCTGACAAGGAAATCCTCAACATTGTGAAGGAGAACTTTGATTTCAGGCCTGGCATGATCTCCATCAACCTTGACCTCAAGAGGGGTGGGAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGAGATGACCCTGACTTCACATGGGAAGTGGTGAAGCCCCTCAAGGGGGAAAAGGTATCTGCCTAA 1374 0.5233 MWWPRHDSSHFTDRRHCITRLRFIPRSNLSRSKCPSLDFALLGRFFASSSLVVLVLEPEAIKMAQETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAGGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILNIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKGEKVSA 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1696 457 CDD S-AdoMet_synt 69 448 - -
Ssu1g1696 457 Pfam S-adenosylmethionine synthetase, N-terminal domain 68 165 IPR022628 GO:0004478|GO:0006556
Ssu1g1696 457 SUPERFAMILY S-adenosylmethionine synthetase 179 303 IPR022636 GO:0004478|GO:0006556
Ssu1g1696 457 ProSitePatterns S-adenosylmethionine synthase signature 2. 330 338 IPR022631 GO:0004478|GO:0006556
Ssu1g1696 457 Gene3D - 181 445 - -
Ssu1g1696 457 Hamap S-adenosylmethionine synthase [metK]. 66 457 IPR002133 GO:0004478|GO:0005524|GO:0006556
Ssu1g1696 457 Pfam S-adenosylmethionine synthetase, C-terminal domain 304 445 IPR022630 GO:0004478|GO:0006556
Ssu1g1696 457 TIGRFAM metK: methionine adenosyltransferase 69 451 IPR002133 GO:0004478|GO:0005524|GO:0006556
Ssu1g1696 457 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 66 456 IPR002133 GO:0004478|GO:0005524|GO:0006556
Ssu1g1696 457 Gene3D - 75 343 - -
Ssu1g1696 457 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 4 66 456 - -
Ssu1g1696 457 SUPERFAMILY S-adenosylmethionine synthetase 304 451 IPR022636 GO:0004478|GO:0006556
Ssu1g1696 457 ProSitePatterns S-adenosylmethionine synthase signature 1. 183 193 IPR022631 GO:0004478|GO:0006556
Ssu1g1696 457 Gene3D - 68 306 - -
Ssu1g1696 457 SUPERFAMILY S-adenosylmethionine synthetase 67 173 IPR022636 GO:0004478|GO:0006556
Ssu1g1696 457 Pfam S-adenosylmethionine synthetase, central domain 181 302 IPR022629 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1696 Ssu-Chr1 41548378 41550546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1696 K00789 - gmx:100787994 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1696 1 41548378 41550546 Ssu1g1696 1 41548378 41550546 ECH
Ssu1g1696 1 41548378 41550546 Ssu4g0536 4 8420218 8421402 ECH
Ssu1g1696 1 41548378 41550546 Ssu7g1827 7 36905134 36906315 ECH
Ssu1g1696 1 41548378 41550546 Ssu7g1902 7 38112435 38113619 ECH