Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02666 ATGGAACCACGAGGCACAATATGGTCCATTCATTGCTGGGAAACGAGGCACACGATGCCACATGCATATGGAGTTGAGGGTGATGGTGAGGGAGAGTTCCGGAAGGTGCTACCGTGGAAAACGAGGAGATCGATGGCTGAAGATGCTCCGAGCAACACGTCTCTGATATTGGCTCAGAGAAGAACCACGAGGAAGGACCCTTTGGACAACTTTAACCGTTACACCGGTGGTTGGAATATCAGCAATCGCCACTACATTGCTTCAGTGGTTTTCACTGCGGTTCCCTTCTTTGTTGTTGCTGCGGTCTGGTTTGTGATTTTTGGGCTCAGTTTATCCCTAATCTGTTTGTGTTACTGCTGTTGTCCAAGAGAACCTTATGGTTATTCACGTTTGGCCTATGCTTTATCCTTGATCTTGCTCATTCTCTTCACCGTTGCAGCAATAGTTGGATGCGTCCTTCTTTACACTGCTCAGGGGAAGTTTCATGGGAGCACCATGAACACACTGGAATACGTGGTGAGTCAAGCTGACTTCACTGCCGAAAACCTCAGGAATGTGTCAGATTATTTTGATGCAGCTAAGAAGATTGGAGTCGATGCCGTTTTTTTGCCTGCTGATGTTCAGAAGGAGATTGACGATATTAAGACAAAGATTAATTCTTCTGCTGCAGAACTTTCCAGCAAGACTGAAGATAATTCAGAGACAATTAAAGATGTCATAGATGCAATGAGACTGGCTCTGGTTATTGTTGCTGCTATTATGCTCTTTCTTGCATTTGTTGGATTTTTATTATCAATATTTGGGCTGCAAGGTCTTGTATACTTCTTGATCCTTATTGGGTGGATTCTTGTTGCTGGCACATTTATACTTTGTGGTATATTTCTCTTTCTTCACAATGTGGTTGGAGATACATGTGTTGCCATGAATGAGTGGGTGCAGAACCCTACTGCACTGACAGCCTTGGATGAAATTCTTCCGTGTGTAGATAATGCAACTGCCCAGGAAACCTTGACACGAACAAGGGATGTGACTCATCAACTTGTTAAATTAGTTGACAACATCGTTTCCAATGTCACTAATAGAAATTTCCCACCTGCTGCTGGACCCTTGTACTACAATCAATCAGGGCCCTTGATGCCTCTTCTTTGTAATCCATTTAATCCTAACCTCAGTAATCGGTCGTGTGCGGCTGGGGAAGTTCCGTTGGACAATGCTGCAGAGGTGTGGAAGAACTACACTTGTGAGGTTTCTTCGTCAGGCATTTGCAAGACGCCCGGTCGGATGACGCCGATCATTTACGGGCAACTGGAAGCTGCAGTGAACATAAGTTATGCCTTGTATCATTATGGTCCATTCTTGGTTGATCTACAAGACTGCACTTTCGTGCGGAAAACATTCACAGACATCAGCAACCAATACTGTCCTGGTCTGCAGACAAATAGTCAGTTGATTTATATTGGTTTGGTTTTGGTATCTGCTGCTGTAATGCTGTCTTTGATCTTTTGGGTCATCTATGCAAGGGAGCGGCGGCACCGTGTTTATACTAAACAGTTCATTGACGGCTAA 1566 0.4444 MEPRGTIWSIHCWETRHTMPHAYGVEGDGEGEFRKVLPWKTRRSMAEDAPSNTSLILAQRRTTRKDPLDNFNRYTGGWNISNRHYIASVVFTAVPFFVVAAVWFVIFGLSLSLICLCYCCCPREPYGYSRLAYALSLILLILFTVAAIVGCVLLYTAQGKFHGSTMNTLEYVVSQADFTAENLRNVSDYFDAAKKIGVDAVFLPADVQKEIDDIKTKINSSAAELSSKTEDNSETIKDVIDAMRLALVIVAAIMLFLAFVGFLLSIFGLQGLVYFLILIGWILVAGTFILCGIFLFLHNVVGDTCVAMNEWVQNPTALTALDEILPCVDNATAQETLTRTRDVTHQLVKLVDNIVSNVTNRNFPPAAGPLYYNQSGPLMPLLCNPFNPNLSNRSCAAGEVPLDNAAEVWKNYTCEVSSSGICKTPGRMTPIIYGQLEAAVNISYALYHYGPFLVDLQDCTFVRKTFTDISNQYCPGLQTNSQLIYIGLVLVSAAVMLSLIFWVIYARERRHRVYTKQFIDG 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02666 521 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 49 510 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02666 Spst-Chr9 60711456 60718257 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02666 - - gsj:114387485 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02666 9 60711456 60718257 Spst9g02666 9 60711456 60718257 ECH
Spst9g02666 9 60711456 60718257 Spst4g02448 4 64835978 64840969 ECH
Spst3g05029 3 102086637 102089316 Spst9g02666 9 60711456 60718257 ECH
Spst3g05029 3 102086637 102089316 Spst9g02666 9 60711456 60718257 PCT