Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02448 ATGGAGGAAATCACTATTCCTTCAGTCACAGAACTCTTGAATTCTGGTGTTCGTTTCTTACCCACCAAGAGCATATCAAACATCAGTTTTGACGCAAAAACATGCACGTTTTACCTTCCCACAGTTTGTTTGGACGTTAATACTAAAGTTTTCCTGAAAAATTTGGTTGCATACGAAGCATCAGTTGCATCGGGGCCCTTGGTTCTAACCCGTTTCACCGAGTTGATGAACGGGATTATAGACTCGGAGGAAGATGCAAGGATTCTCAGAGAAAAAGGGATCATTCAGAACCATTTAAAGAGTGATAAAGAAGTGGCTAATCTGTGGAATGGGATGAGCAAGTCTTTGAGATTGTCAAGGGAACCATTGCTGGATAAGGTTATTGAAGATGTTAACAAGTATTATAACTGTAGATTGAAGGTTAAAGTTGTGAAGTTCATGAAGTCAAACGTAATTGGAGCGATTTTCCTTTACACTGGACTGGAGACATTTGAGACTAATGCAAATGATGTATCAGATATTCTGGTCACAAGAGCAAATACAGTAGTTGATATTGTTCAAAATGTAATAACCAATCTTGCAGCGGCTAAGAACTTACAAGTAGCTAGTTTTACTCTTCCAAGTGATATGAAGAACGGCATTGAAGTGGCTGAAAGATTCTCCTATAAAACTGATGTGATTCAGAGCCAAGCAGAGGAAACTGCAAGAATCTCCATGGAATTCCTGAAAGCTATAAGTGAGAGTCTGATCATTGTTGGCACCATGCTGCTTCTGTTGGCAGCTGTTGGCTTCACTGACACATGTGTTGCAATGGATGAATGGGTTCAACACCCTCGAAGTGAATCAGCTCTAAGTAGACTTCTTCCTTGCATGGATGAGGCCACAACCCAAAAAACCTTGGACATAAGCAAAAACACCTCATTCCAAGTGGTAGATTTGGTTAATGCATTTGTAGAAAAGGTAGCCAATGCTGATTTGCCTCCTATGAAGGCTGATAAGGACATATACTACAATCAATCTGGTCCACATTTGCCCCTCCTCTGCAATCCATTTTTCCCTAACTTGACTGAAAGGCCATGTGATGCAGACGAAATAAGCTTAAGGGGTGCACCAACAGCATATCAAAGTTTTATATGCAATACATCCCCATCTGGTTTGTGCATCACAATGGGGAGATTAACTCCTTCCCTGTACTCAAAGATTATGGTGGCTAACAACTTAAGTGACTCGTTGCATCGACATGGTCCACTCTTAGCTCGATTAGTAGATTGTTCTTTTGTTATTGACACTTTTGATCAAATCAACAAGGATGATTGCCCATCGTTCAAGCGATACACCCACCAGACTTTCATTGGCTTGGTCTTGGTTTCAGCTGCAGTTATGTGCTCTGTGATCTTGTGGGTAGTTTTTGTTGAAGAAAGACGAGCTCAAATATCTTCAACCAAGTTCAAGAGTTACCTTAACTAA 1467 0.4063 MEEITIPSVTELLNSGVRFLPTKSISNISFDAKTCTFYLPTVCLDVNTKVFLKNLVAYEASVASGPLVLTRFTELMNGIIDSEEDARILREKGIIQNHLKSDKEVANLWNGMSKSLRLSREPLLDKVIEDVNKYYNCRLKVKVVKFMKSNVIGAIFLYTGLETFETNANDVSDILVTRANTVVDIVQNVITNLAAAKNLQVASFTLPSDMKNGIEVAERFSYKTDVIQSQAEETARISMEFLKAISESLIIVGTMLLLLAAVGFTDTCVAMDEWVQHPRSESALSRLLPCMDEATTQKTLDISKNTSFQVVDLVNAFVEKVANADLPPMKADKDIYYNQSGPHLPLLCNPFFPNLTERPCDADEISLRGAPTAYQSFICNTSPSGLCITMGRLTPSLYSKIMVANNLSDSLHRHGPLLARLVDCSFVIDTFDQINKDDCPSFKRYTHQTFIGLVLVSAAVMCSVILWVVFVEERRAQISSTKFKSYLN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02448 488 Pfam Plant protein of unknown function 3 148 IPR004158 -
Spst4g02448 488 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 146 264 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02448 Spst-Chr4 64835978 64840969 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02448 - - pvu:PHAVU_010G158000g 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05029 3 102086637 102089316 Spst4g02448 4 64835978 64840969 ECH
Spst9g02666 9 60711456 60718257 Spst4g02448 4 64835978 64840969 ECH
Spst4g02448 4 64835978 64840969 Spst4g02448 4 64835978 64840969 ECH