Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05029 ATGAGAAGACAAGCAGAGGCTTTAAAGTCTGAGCAGCTAGCATTTCTTCTCAGTAGAAGAAGCCACGCGCATGCACGCCATAACCATGACATTAACCTCTTAACAATCATGCTCCGCTTCACATCAAACTCCGACCACTCCTTCTTCTTTCTCTTCTTCTTCCTCTCTCTCTTTCTCTTTTCCACTTCTGCTCCAACACCTTCAGATGGCGTTGAAGTTTTTGGCGAGGAACTGTACGAGGAAGAGGGGGTAGTTCCATGGACGGCGAGGAGATCAACGGCGGAAGTTGCAAGCAGCAAGAATGGAACGCTGGTGCTTGCTGAAGAGAGAACTCGCCGGAAAGACTGGTTTAACGGTTTTCGCCGTTACACCGGTGGTTGGAATATCAGCAGCGCCTATTATATAACGGTTTTTCACTTCTTCTTGCACTGCATTTTAATTAAGCGCTACGCGCTTTTGCCACGTGTTTTCCGTTATGTCCACTGCGGTTCCTTTATTCGCTGTGGCTTTAGCCTGGTTCGTGATTTTTGGAGATCTTATACTCGTCAGCTGTGCGTGTTACTGCTGTTAGCTGGATGCACTCAGTTGTACTCTGGTCAGTCGAAGATTGGTGGAAGCACTTCGAACACACTTGATTACGTTGTGAGTCAGGCTCAATCTGTAGCTGAAAACCTGACTATCATGTCAACTTATTTTGATTCAGCTAAGCATATTGTGCATGGGGTTCCTTTCTCCCTACACATTGATTTTGGACCCGACATTGATGACATCAAAATCAAAGTCCTCGTTGCTGCTGATTATCTCTCCAACACGGTTAAAGCTAACTCCAAGATCATACACAAAGTCATAGATGGAGTAAGACTGGCTCTCATTATTGTTGCTGCTGTTTTGTTCTTTGTTGCATTTCTCCGACTCATTTTTTCTTTACGTGGGTGGCAGTGTCCAGTGTACTTCTTGGTAGTTATTGGATGGATTCTTGTCACTGGCACCTTGTTACTCTGTGCTGCATTTCTTTTTGTTTATAATGTGACTGGTGATACATGTGTTGCGATGGATGAGTGGGTTGTGAACCCCACTACCCACACTGCAGTGGATGAAATTCTTCCGTGCGTGGAGAAAGCAACTGTGTGCGAGGTTTCGTTGGCTGAACAATGTACGAGTGCAGGTCGTTTGACGCCGACCATATACACGAAACTGGGGGATGCAGTGAATGTGACGCGTGGTTTATTTGAGTATGGGCCATTTTTTGCTGATTTAGTTGATTGCAGTTTTGTTCGGAAAACGTTCAATGAAATTAGCAGCACTTATTGTCCACCTTTGCGAAGATACATTATACGGGTTTGTGTGGCATCAGTTGTGGTTTCTGCAGCGGTTATTGTCTCCTTGGTATCTTCGGTCGTCTTTGTCAGAGAACAGTGCCTCTATCTTCACGGCAATGGTGCTCATTAG 1449 0.4527 MRRQAEALKSEQLAFLLSRRSHAHARHNHDINLLTIMLRFTSNSDHSFFFLFFFLSLFLFSTSAPTPSDGVEVFGEELYEEEGVVPWTARRSTAEVASSKNGTLVLAEERTRRKDWFNGFRRYTGGWNISSAYYITVFHFFLHCILIKRYALLPRVFRYVHCGSFIRCGFSLVRDFWRSYTRQLCVLLLLAGCTQLYSGQSKIGGSTSNTLDYVVSQAQSVAENLTIMSTYFDSAKHIVHGVPFSLHIDFGPDIDDIKIKVLVAADYLSNTVKANSKIIHKVIDGVRLALIIVAAVLFFVAFLRLIFSLRGWQCPVYFLVVIGWILVTGTLLLCAAFLFVYNVTGDTCVAMDEWVVNPTTHTAVDEILPCVEKATVCEVSLAEQCTSAGRLTPTIYTKLGDAVNVTRGLFEYGPFFADLVDCSFVRKTFNEISSTYCPPLRRYIIRVCVASVVVSAAVIVSLVSSVVFVREQCLYLHGNGAH 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05029 482 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 375 468 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05029 Spst-Chr3 102086637 102089316 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05029 - - pvu:PHAVU_003G173200g 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05029 3 102086637 102089316 Spst4g02448 4 64835978 64840969 ECH
Spst3g05029 3 102086637 102089316 Spst9g02666 9 60711456 60718257 ECH
Spst3g05029 3 102086637 102089316 Spst3g05029 3 102086637 102089316 ECH
Spst3g05029 3 102086637 102089316 Spst9g02666 9 60711456 60718257 PCT