Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00991 ATGGACAAGACTAAGTTGAGACAACAAGCCATGTTCATTCGAAGATCACTCTTTGACGAGGGGTTCCTTGATGAGCAATTCATTCAGTTAGAGGAATTACAAGACGATGTTAATCCCAATTTTGTTGAAGAAATTGTGACCCTTTTCTACAGTGACTCTATAAGACTCATCTCCAACATAGAAAGAGGACTGATGAGAAACCCTCCAAATTTCACCAAGCTAGATGATTACATGCATCAGTTCAAGGGTAGTTGCTCAAGCATTGGAGCAAAGAAGGTGACGACTGAATGTAGCAGATTCAGTGAGTATTGTGCAGCAGAAAACTCTGAAGGAATACCTTTTCAGATGCTCCAGGACTTTCCAACAGATCTATCTAGAGTATACGACTTTGAAGAAGAAGCTCGAGACCTACTTTCAGGGAAAGGTTCAGTTTTTTTGACAACTGCGAACGGAGAGGGGAATCACAAATCAGAATCATATTTTTCCTCTTTGGGAGGTGCAAATTGCCGACTGAGACGGGAACGCGTCCAAGGATCAAGGGATGCTCTCTGTGGTGGCTGA 561 0.426 MDKTKLRQQAMFIRRSLFDEGFLDEQFIQLEELQDDVNPNFVEEIVTLFYSDSIRLISNIERGLMRNPPNFTKLDDYMHQFKGSCSSIGAKKVTTECSRFSEYCAAENSEGIPFQMLQDFPTDLSRVYDFEEEARDLLSGKGSVFLTTANGEGNHKSESYFSSLGGANCRLRRERVQGSRDALCGG 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00991 186 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 141 IPR008207 GO:0000160
Spst9g00991 186 FunFam Histidine-containing phosphotransfer protein 1 1 128 - -
Spst9g00991 186 Pfam Hpt domain 44 125 IPR008207 GO:0000160
Spst9g00991 186 Gene3D HPT domain 2 144 IPR036641 GO:0000160
Spst9g00991 186 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 9 112 IPR045871 GO:0000160|GO:0009927|GO:0043424
Spst9g00991 186 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 118 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00991 Spst-Chr9 8822289 8826560 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00991 K14490 - gmx:100780856 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00991 9 8822289 8826560 Spst9g00991 9 8822289 8826560 ECH
Spst4g02317 4 63902222 63903332 Spst9g00991 9 8822289 8826560 ECH
Spst5g00216 5 1866885 1867915 Spst9g00991 9 8822289 8826560 ECH