Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02317 ATGGACAGAAACCAATCCCGCAGGCAGGTTGCTGCAATGAAACAGTCGCTCTTTGATCAGGGGTTATTGGATGAACAATTTATCCAACTGGAGGAATTGCAGGATGATGCAAATCCCAACTTTGTTGAGGAAATTGTCACGCTTCACTACCGTGATTCATCACGGCTAATCACAAGCATAGAGCAGGCTCTCAAAGAGAGGAACCCTCTGGATTTTAACAAGCTAGACACTCTTATGCATCAGTTCAAAGGAAGCAGCTCAAGCATAGGAGCCAAAAAGGTGAAAGCAGAGTGCAATCTGTTCAGGGAATATTGCAGGGCAGGAAGTGCAGAAGGATGCATGAGGAGCTTCCAACAATTGAAGAGAGAATATGCTGCACTTAGAAAGAAACTTGAAGCTTATTTTCAGTTGGCAAGGCAAGCAGGACCCCAGGAAACAGCATGTCGCTCCAAATAA 456 0.4496 MDRNQSRRQVAAMKQSLFDQGLLDEQFIQLEELQDDANPNFVEEIVTLHYRDSSRLITSIEQALKERNPLDFNKLDTLMHQFKGSSSSIGAKKVKAECNLFREYCRAGSAEGCMRSFQQLKREYAALRKKLEAYFQLARQAGPQETACRSK 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02317 151 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 5 144 IPR045871 GO:0000160|GO:0009927|GO:0043424
Spst4g02317 151 Gene3D HPT domain 1 147 IPR036641 GO:0000160
Spst4g02317 151 Pfam Hpt domain 50 128 IPR008207 GO:0000160
Spst4g02317 151 Coils Coil 110 137 - -
Spst4g02317 151 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 134 IPR008207 GO:0000160
Spst4g02317 151 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 140 IPR036641 GO:0000160
Spst4g02317 151 FunFam Histidine-containing phosphotransfer protein 4 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02317 Spst-Chr4 63902222 63903332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02317 K14490 - gmx:100798055 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02317 4 63902222 63903332 Spst5g00216 5 1866885 1867915 ECH
Spst4g02317 4 63902222 63903332 Spst4g02317 4 63902222 63903332 ECH
Spst4g02317 4 63902222 63903332 Spst9g00991 9 8822289 8826560 ECH
Spst5g00216 5 1866885 1867915 Spst4g02317 4 63902222 63903332 PCT