Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00216 ATGGACAAAATCCATTCCCACAGGCAGGTAGCTGCTATCAAACACTCCCTCTTTGATCAGGGATATTTGGATGAGCAATTTATCCAACTGGAAGAATTGCAGGATGATGCAAATCCTAACTTCGTTGAGGAAATTGTCACTCTCTACTACCGTGATTCCTCGAGGCTTATCTCAAACTTGGACCACACACTGGAAAGGAACCCTCTGGATTTCAACAAGCTGGACACACTTATGCACCAGTTTAAAGGAAGCAGCTCAAGCATTGGAGCTAAAAGGGTGAAAGCAGAATGCACTCTGTTTAGGGAATATTGCAGGGCAAGAAATGGAGAAGGATGCAGGAGGAGCTTCCAACAAATGAAGAAGGAATATGCAACACTGAGAAAGAAACTTGAAACATATTTTCAGCTGGCTAGGCAAGCTGGGCCCCTGGAGACAGCATACAGGCCCAAGTAA 453 0.4481 MDKIHSHRQVAAIKHSLFDQGYLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISNLDHTLERNPLDFNKLDTLMHQFKGSSSSIGAKRVKAECTLFREYCRARNGEGCRRSFQQMKKEYATLRKKLETYFQLARQAGPLETAYRPK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00216 150 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 139 IPR036641 GO:0000160
Spst5g00216 150 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 6 142 IPR045871 GO:0000160|GO:0009927|GO:0043424
Spst5g00216 150 Pfam Hpt domain 44 127 IPR008207 GO:0000160
Spst5g00216 150 FunFam Histidine-containing phosphotransfer protein 4 1 145 - -
Spst5g00216 150 Gene3D HPT domain 1 146 IPR036641 GO:0000160
Spst5g00216 150 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00216 Spst-Chr5 1866885 1867915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00216 K14490 - gmx:100800310 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02317 4 63902222 63903332 Spst5g00216 5 1866885 1867915 ECH
Spst5g00216 5 1866885 1867915 Spst5g00216 5 1866885 1867915 ECH
Spst5g00216 5 1866885 1867915 Spst9g00991 9 8822289 8826560 ECH
Spst5g00216 5 1866885 1867915 Spst4g02317 4 63902222 63903332 PCT