Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00641 ATGTACGCCCGCGACATTGCAAAGACACAACACAAGTTCAGGTTCCAAAACGACGCTAAAAACCCCTCCTTTTCCTCCTCCCTCCTCGACACAATCTACCGCTCCATCGACGAAGGAGAGAGGAGGACCAACGACATGAAGTTCCACACCCAAACAATGGTCAAGAAACAGAGCAGACTCCTCGTCGAAGAAGAGTTAACGGCGGCCAGCATTCGCCGCGCTTGTTTGGTGGAAAAATGGAAAGGAAGCGAGAAGACAGTGAAAGCACAAATGGAGAGAAAATCAAAATCATCGCGCTTGCATCGTCACGATCACGACCAGGAGGTAATGTTCTTCACTTCAACTTCCAGTTCCTCGGATTCCAGCTCTGGGTTGTTGTCCTCCTCTGACACAGAATCCTTGTACGGATCGAGGTCGCGAGTTTCGTGTTTTGCTCCTTCGAGACCAAAGCCATCGATGACGTCAGCGGGCAATGAAGAGCGTTTGATCAAGTCAAAATCGAGGGCGTTGAAGATCTACAACAATCTGAAGAAGGTGAAGCAACCCATCTCTCCTGGGGGGAAGCTAAGTACTTTTCTTAACTCTCTGTTGGGGAACGCGAAGAAAACCAAAACCTACGACGAAGCAAAACCCAAGTCGGGACAAGAATCCACGTGTTCCTCTGCGTCCTCGTTCTCACGCTCTTGTCTGAGCAAGGCTTCGCCTTCCTCCAACAAATTGCGCGACGGGGTTAAGCGAACGGTGCGTTTTTACCCTGTGAGCGTGATCGTGGACGAGGATAGTCGACCGTGTGGGCATAAGTGTCTGTATGAAGAAGACGCCACGCGCGTAATGGCAGTGTCCATGCCAACCGTGTGGAAAATTGGACGCAACAAGAACGAAGAAGAGGAAAAGGTCGTGGATAAGAGCAGGCGCGTGGAGGAGGCCGCTAGAGAGTTTTTGAAAGAGTACCATCGAAACCAGAAGAAGAACAATTTGATTAAGTTGAGGGATTTTCCTAATGCGGTGGAAGATGACGATGAGGATGATACCGATGATGACGATGCAGCGAGTTATTCAAGTTCGGATCTGTTCGAGCTCGATCACCTTGAAGTGATGGGAAACAATAGGTATCGCGAGGAGCTTCCTGTGTACGAGACCACTCATGTTAGTACTAATCGCGCCATTGCTAATGGCCTCATATAA 1185 0.4945 MYARDIAKTQHKFRFQNDAKNPSFSSSLLDTIYRSIDEGERRTNDMKFHTQTMVKKQSRLLVEEELTAASIRRACLVEKWKGSEKTVKAQMERKSKSSRLHRHDHDQEVMFFTSTSSSSDSSSGLLSSSDTESLYGSRSRVSCFAPSRPKPSMTSAGNEERLIKSKSRALKIYNNLKKVKQPISPGGKLSTFLNSLLGNAKKTKTYDEAKPKSGQESTCSSASSFSRSCLSKASPSSNKLRDGVKRTVRFYPVSVIVDEDSRPCGHKCLYEEDATRVMAVSMPTVWKIGRNKNEEEEKVVDKSRRVEEAAREFLKEYHRNQKKNNLIKLRDFPNAVEDDDEDDTDDDDAASYSSSDLFELDHLEVMGNNRYREELPVYETTHVSTNRAIANGLI 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00641 394 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 15 394 IPR039621 GO:0009734
Spst9g00641 394 Coils Coil 292 312 - -
Spst9g00641 394 MobiDBLite consensus disorder prediction 330 353 - -
Spst9g00641 394 MobiDBLite consensus disorder prediction 140 161 - -
Spst9g00641 394 MobiDBLite consensus disorder prediction 113 132 - -
Spst9g00641 394 MobiDBLite consensus disorder prediction 203 239 - -
Spst9g00641 394 MobiDBLite consensus disorder prediction 212 239 - -
Spst9g00641 394 MobiDBLite consensus disorder prediction 336 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00641 Spst-Chr9 5602864 5604048 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00641 - - vra:106761469 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00641 9 5602864 5604048 Spst9g00641 9 5602864 5604048 ECH
Spst9g00641 9 5602864 5604048 Spst4g02181 4 62555755 62557023 ECH
Spst9g00641 9 5602864 5604048 Spst8g02389 8 35318672 35319790 ECH
Spst3g03370 3 83408428 83409621 Spst9g00641 9 5602864 5604048 ECH
Spst4g02181 4 62555755 62557023 Spst9g00641 9 5602864 5604048 ECH