Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02181 ATGGACAAGTGGGACAACATACCATCAAGAAAACAGCACCAAAGAGAAAACCCTTCTTTCTCTAGCACTCTCCTTGACGTTATCTACCGTTCAATTGACGAAGATCAGACGGAGGAGAAGGAAGAGGAGCAACTCATCTTCTACAGAGAAACCATGAGAAAGCAGAAACAGAGCAATTGTTTCAGAGAGGACAAAACTGAAGCTGAGAAACACAACTCTCGCAGGGCCAGGAAGGTGGAGAATTGGATAGAGAAGAGAACCAGCGAGAAGGTTCTAATGGGGAGAAACTCGTTGACGGAATTTGAAAGAAGAACACGAAACAATTCGATTTCAAACACTCTCTCCATGTATTCAAGCTCAACCTCTTCCTCTGAGTCAAGCTCTGTTGGGGGCTTCTCTTCTTCAGAGTCAGAGTCCTTCTATGGTGTGCAAAGGCCAAAGCCAGTTAAAACCAATGTTTCTGACAAAACCAAAAACAACTTTGATGCTGCACTTCACAATCACAACTTCAGGAGCCACTCTTCCCAAACCCAGAAGCCAAAGCATGAGAACGGTTTTGGCAAAACCAAGTCCAAAGCCTTGAAAATCCTTTATGGTGAGTTGAAGAAAGCAAAGCAACCAATTTCACCAGGTGCAAGACTCGCTAGCTTTCTCAACTCTCTCTTCACTTCAAATGGAAATGCCAAAAAAGCAAAGGTTTCAACAACAACTACATCTACTTGTCGTCCTGTCTTGATTCCGGTTGTGGCAAATCGTGCCGCCGATACTAAATCAGCGGCACAACAACCTGGTTCTACATGTTCATCAGCGTCTTCATTTTCAAGGTCTTGTTTGAGCAAAACTCCTTCTTCAAGATCAGGTGCCAAAAGGTCTGTGAGGTTTTGCCCGGTGAGTGTGATAGTGGATGAAGATTGTAGGCCTTGTGGGCACAAGAATGTTTACGAGGGTGAAGAAGGTTTGGTGGCTTCCATTGGAAAGAACAGGAGTGAGGAACTGAGGCTGCATGTCATGCAGGAGAGTCGCAGGGTGGAGGAGTTAGCAAGAGACTTGTTGAAGAACTATCAGAAAAAGGGTGAAGTGGAGTTTGATGCTGTTATGCATTATGAGGAGGAAGAAGAAGATGATGTGGCCAGTTGTTCAAGTTCTGATCTATTTGAGTTGGATAATCTATCAGCAATTGGGATTGAGAGGTATAGGGAAGAGTTACCTGTGTATGAAACTACCCATTTCAATACCAACAGAGCCATTGCCAATGGCTTCATTCTGTAA 1269 0.4405 MDKWDNIPSRKQHQRENPSFSSTLLDVIYRSIDEDQTEEKEEEQLIFYRETMRKQKQSNCFREDKTEAEKHNSRRARKVENWIEKRTSEKVLMGRNSLTEFERRTRNNSISNTLSMYSSSTSSSESSSVGGFSSSESESFYGVQRPKPVKTNVSDKTKNNFDAALHNHNFRSHSSQTQKPKHENGFGKTKSKALKILYGELKKAKQPISPGARLASFLNSLFTSNGNAKKAKVSTTTTSTCRPVLIPVVANRAADTKSAAQQPGSTCSSASSFSRSCLSKTPSSRSGAKRSVRFCPVSVIVDEDCRPCGHKNVYEGEEGLVASIGKNRSEELRLHVMQESRRVEELARDLLKNYQKKGEVEFDAVMHYEEEEEDDVASCSSSDLFELDNLSAIGIERYREELPVYETTHFNTNRAIANGFIL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02181 422 MobiDBLite consensus disorder prediction 256 288 - -
Spst4g02181 422 MobiDBLite consensus disorder prediction 115 154 - -
Spst4g02181 422 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 10 422 IPR039621 GO:0009734
Spst4g02181 422 MobiDBLite consensus disorder prediction 1 22 - -
Spst4g02181 422 MobiDBLite consensus disorder prediction 115 141 - -
Spst4g02181 422 MobiDBLite consensus disorder prediction 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02181 Spst-Chr4 62555755 62557023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02181 - - gmx:100798956 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03370 3 83408428 83409621 Spst4g02181 4 62555755 62557023 ECH
Spst9g00641 9 5602864 5604048 Spst4g02181 4 62555755 62557023 ECH
Spst4g02181 4 62555755 62557023 Spst4g02181 4 62555755 62557023 ECH
Spst4g02181 4 62555755 62557023 Spst9g00641 9 5602864 5604048 ECH
Spst4g02181 4 62555755 62557023 Spst8g02389 8 35318672 35319790 ECH