Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03370 ATGCACACAAGAGAGAGGGAGAAGGAGAAGGAGAAGCCCATGAAGGAAGACACGTGCCCACAAAGGAGAAGAACCCCTTCCTTCTCCTCCTCTCTCCTCGACGCCATTTACCGTTCCATCGACGAGTCAAAATCCAACCTTCACGAGGATCAACAACTGGGTCTCTTCGATCAAACCACGTCTGAAAAAGCCTGCAAGAAAGAAAGAATGAATCTTCGCCGAGCCGTGATGCTAGAAGATTGGATGGAGAAGCATAGTTCGCATTCTCATTCCCATTCCCACAGTTTGCAGTTGCTAAACTCGAGTTCAAGCTCCTCAGAATGCAGCTCTGGGGGGATATTTTCCTCTTCAGAAACCGACACGACAACCTTGAAGAAACAAAGACCAAGACCCACATCGGAGAAGAAGAAACAAGACCACAGGGTTTCCGAGAAGCAGAATAAAGAGGGTGGTTTCGCAAGGACCAAGTTGCGGGCGTTGAAAATTTACGGCGAATTGAACCAGAGAGTGAAGCAGCCCATTTCACCAGGGAGTAGAATCGCTAGCTTCCTTAGCTCCATCTTCAATTCCCAGAACGTGAAGAAAGCCAAAATGTGTTACGTTGGTGCTGTTGAAGATGTTAGCTTGGAACACAAATCAAAGTCCCCGTGTTTCTCTTCCACTCCTTCTTCGTTCTCGAGAAGGTCTTGCATGAGCAAAACACCTTCATCGGCTAAAAAGTCCAACACCAACGGGGTCAAAAGATCCGTCAGGTTTTACCCCGTTAGCGAAATCCTAGGTGAGGATTCTGAACCACAGCCTAGTCATCACAAATGTAGCAACATTTATGAGAGTGAGCCTAATCTCATTGTGAGGAAGGTCACGAGAAGTTCTTCCAGAAAGGAGCTGAATAACACTGTTCGGGGAAAGGAAAATGGAGCTGAAGAAGCAGCAGCGCGTGGTTTTGTAAAAGGTTACCGAAATTCTGGTAAGGGTGAATTTGATTTTAGAGGCTTTTGTGGTAACGAAGACGATGACGACGAGGATGAAGATGAAGAGGATGACGACGATGATGATGATGCGAGTTGTTCAAGTTCAGATTTGTTTGAGCTGGATCATCTTATTGGAGCTGCAAGGTACCAAGAAGAGCTTCCTGTCTATGAAACTACCAATTTGGAAACCAATAAAGCCATTGCTAGTGGTCTATGTTTGTAG 1194 0.4598 MHTREREKEKEKPMKEDTCPQRRRTPSFSSSLLDAIYRSIDESKSNLHEDQQLGLFDQTTSEKACKKERMNLRRAVMLEDWMEKHSSHSHSHSHSLQLLNSSSSSSECSSGGIFSSSETDTTTLKKQRPRPTSEKKKQDHRVSEKQNKEGGFARTKLRALKIYGELNQRVKQPISPGSRIASFLSSIFNSQNVKKAKMCYVGAVEDVSLEHKSKSPCFSSTPSSFSRRSCMSKTPSSAKKSNTNGVKRSVRFYPVSEILGEDSEPQPSHHKCSNIYESEPNLIVRKVTRSSSRKELNNTVRGKENGAEEAAARGFVKGYRNSGKGEFDFRGFCGNEDDDDEDEDEEDDDDDDDASCSSSDLFELDHLIGAARYQEELPVYETTNLETNKAIASGLCL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03370 397 MobiDBLite consensus disorder prediction 44 68 - -
Spst3g03370 397 MobiDBLite consensus disorder prediction 330 358 - -
Spst3g03370 397 MobiDBLite consensus disorder prediction 1 31 - -
Spst3g03370 397 MobiDBLite consensus disorder prediction 123 151 - -
Spst3g03370 397 MobiDBLite consensus disorder prediction 333 358 - -
Spst3g03370 397 MobiDBLite consensus disorder prediction 1 22 - -
Spst3g03370 397 MobiDBLite consensus disorder prediction 213 244 - -
Spst3g03370 397 MobiDBLite consensus disorder prediction 82 151 - -
Spst3g03370 397 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 9 396 IPR039621 GO:0009734
Spst3g03370 397 MobiDBLite consensus disorder prediction 92 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03370 Spst-Chr3 83408428 83409621 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03370 - - gmx:100803228 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03370 3 83408428 83409621 Spst4g02181 4 62555755 62557023 ECH
Spst3g03370 3 83408428 83409621 Spst9g00641 9 5602864 5604048 ECH
Spst3g03370 3 83408428 83409621 Spst8g02389 8 35318672 35319790 ECH
Spst3g03370 3 83408428 83409621 Spst3g03370 3 83408428 83409621 ECH