Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01793 ATGGGCAGCATGCACATAGAAACCCCAGGAACTTTGGCTGATGGAAGCAAAGACTTCGATGAAGATGGACGAGCTAGAAGAACAGGGACATGGGTGACTGCAAGTGCTCACATCATAACGGCAGTGATTGGCTCTGGAGTTCTATCTCTTGCATGGGCAATTGCACAGATGGGTTGGGTGGCTGGTCCTGCAGTGCTCTTTGCCTTCTCTTTTATCACATACTTCACTTCCACTCTTCTTGCTGATTGCTACCGTTCACCAGACCCTGTTCATGGCAAACGAAACTACACATATTCTGAGGTTGTCAAAGCTAACTTAGGAGGTAGAAAATTTCAGCTATGTGGATTGGCTCAGTATATAAATCTTGTTGGTGTAACCATCGGCTACACTATAACTGCATCAATCAGTATGGTGGCGGTGAAGAGATCGAACTGTTTTCACAAACATGGACATGGAGAGAAGTGCTACATAAATAACTACCCTTTCATGATCGTGTTTGCATGCATCCAAATTGTTCTTAGCCAAATACCAAACTTCCATAAGCTCTCTTGGCTCTCTATTGTTGCAGCAGTTATGTCTTTCGCTTATTCTTCCATTGGCCTTGGCCTCTCCCTAGCCAAAGTCGCAGGTGGGGGACACGTGCAAACATCCCTAACAGGGGTGCAAGTTGGGGTGGACGTTTCGGGAATAGAGAAGGTTTGGAGGATGTTTCAAGCGATCGGTGACATTGCTTTCGCTTATGCTTTTTCCAATGTCCTCATTGAGATCCAGGACACCCTGAAATCAAGCCCACCAGAGAACAAAATGATGAAGAGAGCAAGTTTAATTGGGATAATGACAACAACATTATTCTATGTGCTGTGTGGGTGCTTGGGCTACGCTGCATTTGGAAATGATGCACCAGGAAATTTCCTCACAGGGTTCGGTTTCTACGAGCCCTTTTGGCTCATAGACTTTGCCAATATCTGCATCGCAGTGCATTTAGTTGGGGCATACCAGGTGTTTGTGCAACCTATATTTGGGTTTGTGGAGAAATGGAGCAAAGAAAAATGGCCAGAAAGCCAATTCATAAATGGTGAGCATGATGTGACTGTTCCTCTCTGCGGAAGCATAAACTTGAATTTCTTCAGGATGTTGTGGAGGACAACATATGTGGTTATCACTGCTGTTCTAGCAATGCTGTTTCCATTCTTCAATGACTTTCTGGGGCTCATTGGTTCTCTCTCATTCTGGCCATTGACGGTTTACTTCCCTATAGAGATGTACATTAAGCAATCCAAGATGCCAAGATTTTCATTCACATGGACTTGGCTAAAGATTCTGAGTTGGGTCTGTTTGGTCATTTCCATCATCTCAGCTGTGGGTTCAATCCAAGGTCTTGTTGTTGATCTCAAGAAATACAAGCCCTTCCAAGCACAGCAATAG 1425 0.4449 MGSMHIETPGTLADGSKDFDEDGRARRTGTWVTASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLFAFSFITYFTSTLLADCYRSPDPVHGKRNYTYSEVVKANLGGRKFQLCGLAQYINLVGVTIGYTITASISMVAVKRSNCFHKHGHGEKCYINNYPFMIVFACIQIVLSQIPNFHKLSWLSIVAAVMSFAYSSIGLGLSLAKVAGGGHVQTSLTGVQVGVDVSGIEKVWRMFQAIGDIAFAYAFSNVLIEIQDTLKSSPPENKMMKRASLIGIMTTTLFYVLCGCLGYAAFGNDAPGNFLTGFGFYEPFWLIDFANICIAVHLVGAYQVFVQPIFGFVEKWSKEKWPESQFINGEHDVTVPLCGSINLNFFRMLWRTTYVVITAVLAMLFPFFNDFLGLIGSLSFWPLTVYFPIEMYIKQSKMPRFSFTWTWLKILSWVCLVISIISAVGSIQGLVVDLKKYKPFQAQQ 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01793 474 MobiDBLite consensus disorder prediction 1 21 - -
Spst8g01793 474 Pfam Transmembrane amino acid transporter protein 27 461 IPR013057 -
Spst8g01793 474 PANTHER OS05G0424000 PROTEIN-RELATED 29 457 - -
Spst8g01793 474 FunFam Amino acid permease 6 24 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01793 Spst-Chr8 21619332 21622797 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01793 12 472 Organic Solute Cotransporters AT5G49630 76.674 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01793 K24917 - gmx:100782534 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01793 8 21619332 21622797 Spst8g01793 8 21619332 21622797 ECH
Spst8g01793 8 21619332 21622797 Spst9g01335 9 12984085 12986022 PCT
Spst9g00994 9 8862866 8873006 Spst8g01793 8 21619332 21622797 PCT