Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01335 ATGGTTGACATGATTGTCGATGGCACCAAGTATGATCAGCAAACGTTTAACATCTCCCTTGACATGCATCAACAAGGAGACTCTAAATGTTTCGACGATGATGGTCGCCCCAAAAGAACTGGAACAGTGTGGACTGCTAGTGCACACATAATAACCGCAGTGATAGGGTCTGGGGTTCTCTCTCTGGCTTGGGCTATAGCCCAGCTTGGATGGATTGCTGGTCCTGCTGCCATGGCTATCTTCTCTGTTATCACTTGCTTCACTTCCCTTCTTCTCACTGATTGTTATCGTACGGGTGACCCTCTCACTGGCAAGAGAAACTACACTTACATGGATGCTATTCGTTCTAACTTTGGTGGCAGTAGCTTTAAGGTCAAGATGTGTGGACTAGTTCAGTATATTAACCTTTTTGGCATCGCCATTGGTTACACTATAGCGGCTTCCATTAGCATGATGGCAATCGAAAGATCTAATTGTTTCCACAAGAGCGGAGGGAAAGATCCGTGTCATATGAACAGCAATATTTACATGATTTCGTTTGGTATAGTGGAGATTATTTTCTCTCAAATTCCAGGCTTCGATCAACTGTGGTGGTTGTCCCTTGTAGCTGCTGTCATGTCCTTCACATACTCCACTATTGGGCTAGGTCTTGGTATTGGAAAAGTTATTGAAAACAGAAGAGTGGGGGGAAGTCTAACCGGGATAAGCGCTGGTACTGTGACACAAACTAATAAAGTCTGGAGAACCATGCAAGCTCTTGGTGACATAGCATTTGCCTATTCATACTCCTACGTCCTTATAGAAATTCAGGACACAGTGAAATCACCTCCATCAGCATCAAAAACAATGAAGAAGGCATCATTTATCAGTGTCGCAGTCACCACCTTTTTCTACATGCTTTGTGGCTGCTTTGGGTATGCTGCTTTTGGAGATTCAAGCCCTGGAAACCTTCTCACTGGATTTGGCTTCTACAATCCATACTGGCTCCTTGACATTGCTAATGCTGCCATTGTGATCCACCTTGTTGGTTCATACCAAGTTTTCTGCCAGCCCCTCTTCGCTTTTGTTGAGAAAAACGTAGCACGTAGATTCCCAGATAGTGATTTTGTGAACAAACAAATTGAAATCTCAGTCCCTGGTTTCCATCCCTACAAGCTCAACCTCTTCCGATTGGTTTGGAGGACAGTATATGTAGTCCTAAGCACTGTAATATCAATGCTGCTCCCATTCTTCAATGACATAGGAGGACTTCTTGGAGCATTTGGATTTTGGCCCCTTACTGTGTATTTCCCAGTGGAAATGTACATTATTCAGAAGAGAATACCAAAGTGGAGCTCTAAATGGATCGGCCTCCAAACACTTAGCATTGCTTGTCTTTTGGTGACTATAGGAGCTGGAGCTGGCTCTATTGCAGGGATTATCATAGATCTTAAACGTTACAAGCCTTTCAAGACAAACTATTGA 1464 0.4358 MVDMIVDGTKYDQQTFNISLDMHQQGDSKCFDDDGRPKRTGTVWTASAHIITAVIGSGVLSLAWAIAQLGWIAGPAAMAIFSVITCFTSLLLTDCYRTGDPLTGKRNYTYMDAIRSNFGGSSFKVKMCGLVQYINLFGIAIGYTIAASISMMAIERSNCFHKSGGKDPCHMNSNIYMISFGIVEIIFSQIPGFDQLWWLSLVAAVMSFTYSTIGLGLGIGKVIENRRVGGSLTGISAGTVTQTNKVWRTMQALGDIAFAYSYSYVLIEIQDTVKSPPSASKTMKKASFISVAVTTFFYMLCGCFGYAAFGDSSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGSYQVFCQPLFAFVEKNVARRFPDSDFVNKQIEISVPGFHPYKLNLFRLVWRTVYVVLSTVISMLLPFFNDIGGLLGAFGFWPLTVYFPVEMYIIQKRIPKWSSKWIGLQTLSIACLLVTIGAGAGSIAGIIIDLKRYKPFKTNY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01335 487 PANTHER OS05G0424000 PROTEIN-RELATED 41 470 - -
Spst9g01335 487 Pfam Transmembrane amino acid transporter protein 39 475 IPR013057 -
Spst9g01335 487 FunFam Amino acid permease 6 36 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01335 Spst-Chr9 12984085 12986022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01335 29 487 Organic Solute Cotransporters AT5G09220 74.565 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01335 K24917 - gmx:100779910 875.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01793 8 21619332 21622797 Spst9g01335 9 12984085 12986022 PCT