Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00994 ATGGATAAAAAAAAGCTGAAAAGTTTACGTGGATTGTCATGGTTGCTTGCAGGGAACGTTTTCACCGCTACGACGCACATTGTAACGGTGGTTGTAGGAGCAGGGGTGCTGGCTCTGGCATGGGCCATGGCCCAACTTGGATGGATTGCTGGCATAGGCGTTATGATCACATTTGCCTTCATTTCTTTGTACACTTACAGTCTTATAGCTGATTGCTACAGATATCCTGACCCAGTCACTGGCAAGAGAAACTACACTTACATGCAAGCCGTTGAGTCTTACCTTGGTGGAACAATGCACGTGATTTGCGGAGTGGTACTGTATGGGAAACTCGCTGGGATTACTGTGGGCTACGCTATTACTAGTTCTATAAGCATGGTGGCTATAAAGAAAGCCATTTGTTTTCACAGAAACGGCCATGATGCTTATTGCAAGTTTTCAAACAATCCCTATATGATTGCTTTTGGGATTGGGCAAGTTTTATTGTCTCAAATCCCGAATTTTAACAAGTTAACTTGGCTTTCAACCCTTGCTGCCGCTACCTCTTTTGGTTATGCTTTCATTGGAAGCGGGCTTTCTCTGGCAGTGTTGATCCAAGGTAAAGGGCAACCAACAGGTTTATTTGGAAAGAAAGTAGGACCAGACCTATCTGAATCAGAAAAAGTTTGGAACGTTTTCAAAGCTTTAGGAAACATTGCGCTTGCTTCCTCTTTTGCTACTGTTATTTATGATATAATGGACACATTGAAGTCTTATCCACCAGAAAACAAACAGATGAAAAGCGCCAATCTGTATGGAATCACAACAATGACATTACTCTTCGTGCTATGCGGTGGACTTGGGTATGGTGCTTTCGGAGATAACACACCTGGGAACATCCTCACTGGCTTTGGATTTTATGAGCCATACTGGTTGGTCGCCCTTGGCAATGTTTTCATTGTAATCCATATGGTGGGAGCATATCAGGTGATGGCTCAACCACTGTTTCGTGTAATTGAAATGGGAGCTAACATGGCGTGGCCACGTTCAGATTTCATAAACAAGGACTACCGAATCAAAATGGGGTCCTTAAAATGTAACGTCAACCTCTTTAGGTTAATTTATAGGACAATTTATGTGGTATTAGCCTCGGTTCTTGCTATGGTCATGCCATTTTTCAACGATTTCCTTGGCTTCCTTGGAGCAGCTGGGTTTTGGCCACTCATTGTTTTCTTCCCTGTACAAATGCACATTGCACAGAAACAGATAAAAAGACTATCATTCAAGTGGTCTATGCTTCAATTATTGAGCTTTCTGTGCTTCTTAATGTCAGTAGTAGCTGCAGTTGGATCCATTCGTGGAATTTGCATGAATATCAAGAAATACAAACTTTTCAAGTATAAGCAATAG 1389 0.4204 MDKKKLKSLRGLSWLLAGNVFTATTHIVTVVVGAGVLALAWAMAQLGWIAGIGVMITFAFISLYTYSLIADCYRYPDPVTGKRNYTYMQAVESYLGGTMHVICGVVLYGKLAGITVGYAITSSISMVAIKKAICFHRNGHDAYCKFSNNPYMIAFGIGQVLLSQIPNFNKLTWLSTLAAATSFGYAFIGSGLSLAVLIQGKGQPTGLFGKKVGPDLSESEKVWNVFKALGNIALASSFATVIYDIMDTLKSYPPENKQMKSANLYGITTMTLLFVLCGGLGYGAFGDNTPGNILTGFGFYEPYWLVALGNVFIVIHMVGAYQVMAQPLFRVIEMGANMAWPRSDFINKDYRIKMGSLKCNVNLFRLIYRTIYVVLASVLAMVMPFFNDFLGFLGAAGFWPLIVFFPVQMHIAQKQIKRLSFKWSMLQLLSFLCFLMSVVAAVGSIRGICMNIKKYKLFKYKQ 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00994 462 Pfam Transmembrane amino acid transporter protein 19 448 IPR013057 -
Spst9g00994 462 PANTHER OS05G0424000 PROTEIN-RELATED 22 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00994 Spst-Chr9 8862866 8873006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00994 18 459 Organic Solute Cotransporters AT1G10010 54.853 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00994 K24917 - gmx:100781934 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00994 9 8862866 8873006 Spst9g00994 9 8862866 8873006 ECH
Spst9g00994 9 8862866 8873006 Spst8g01793 8 21619332 21622797 PCT