Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01627 ATGGAGTTGATGGGGTGTGGAAGGTTTAGGGGGTGCCTTGTTCTTGTGTTGTTTGCTGCACTGTTGGTGGGTCTAGTGAGTGGAATTGGTGTTAACTGGGGCACACAATTAACACACCCTTTGCCATCGTCCACCGTGGTGAAAATGCTGAAGGACAATGGTATTCAGAAAGTTAAGCTTTTTGATGCTGACCCTGATATTTTAGATGCTCTAAAGAAATCTGGGATTCAGGTGATGGTGGGTATACCAAATGACATGCTCTACACATTGGCCAACAGTATGCAAGCAGCTCAAAAATGGGTTTCCAAGAATGTTTCAGCACACATCTCATCTGGGGGAGTGGACATCAGGTATGTTGCAGTGGGAAATGAACCTTTCTTGTCAACTTACAATGGTTCATTTAAAACCACAACCCTTCCAGCTCTTCAAAACATTCAATCAGCTCTTGTGAAAGCTGGTTTAGGGAATCAGGTTAAAGTCACTGTCCCTCTAAATGCGGACGTGTATCAGAGCGCACAAGTACCTTCTGATGGCGACTTCAGGCAAGACATCCATGATCTCATGGTGCAGATTGTCCAGTTCTTGAGCCAGAACAATGCTCCATTTACCGTGAACATCTATCCTTTCATTAGCCTCTATGAAGACCCCAATTTTCCTGTTGATTATGCCTTCTTCAATGGCTTTCAATCCCCCATAAATGACAATGGAAGGATCTATGACAATGTCTTCGACGCCAACCATGATACTCTCGTATGGGCGCTGCAGAAAAATGGTTTTGGAAACATGCCTATAATTGTAGGAGAAGTTGGGTGGCCTACAGATGGAGACAGAAATGCAAACCTTGAATATGCGCAACGGTTTAACCAAGGGTTCATGTCGCGCTACATCGCCGGAAAGGGGACACCAATGAGGCCTGGTCCTATGGATGCTTACTTGTTCAGTCTCCTAGATGAAGATAACAAAAGCATTCAGCCAGGTAATTTTGAAAGACATTGGGGTTTGTTTTACTATGATGGACAACCCAAGTATCAGCTTAACATAGGATCAAGAAATGGCTTAGTAGCTGCAACTGGGGTAGCATATCTAGCAAAAAAGTGGTGCATCTTGAAACCCTCAGCAAACCTCAACAGTGACCAAGTGGCACCAAGTGTGTCTTATGCTTGTCAAAATGCAGATTGTACAAGCCTTGGATATCAAACTTCATGTGGTAATTTAGATGCTCGTGGTAACATCTCTTATGCATTCAATAGCTATTACCAAGTGAATGACCAGATTGACAGTGCATGCAAATTCCCTGGTCTTTCTGTTGTCACTGACAAAGATCCTTCAACTGGAGATTGCAAATTCAAAATCATGATTCAGACAGATTCTGCTGTCCTACATGGGAATGGGAGAATTTGGCATCTCAGAATAGTACTCTTGTTATGTTTGTTTTTCACTCTTCTGTCACCCTGA 1455 0.4316 MELMGCGRFRGCLVLVLFAALLVGLVSGIGVNWGTQLTHPLPSSTVVKMLKDNGIQKVKLFDADPDILDALKKSGIQVMVGIPNDMLYTLANSMQAAQKWVSKNVSAHISSGGVDIRYVAVGNEPFLSTYNGSFKTTTLPALQNIQSALVKAGLGNQVKVTVPLNADVYQSAQVPSDGDFRQDIHDLMVQIVQFLSQNNAPFTVNIYPFISLYEDPNFPVDYAFFNGFQSPINDNGRIYDNVFDANHDTLVWALQKNGFGNMPIIVGEVGWPTDGDRNANLEYAQRFNQGFMSRYIAGKGTPMRPGPMDAYLFSLLDEDNKSIQPGNFERHWGLFYYDGQPKYQLNIGSRNGLVAATGVAYLAKKWCILKPSANLNSDQVAPSVSYACQNADCTSLGYQTSCGNLDARGNISYAFNSYYQVNDQIDSACKFPGLSVVTDKDPSTGDCKFKIMIQTDSAVLHGNGRIWHLRIVLLLCLFFTLLSP 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01627 484 Pfam X8 domain 365 434 IPR012946 -
Spst8g01627 484 FunFam Glucan endo-1,3-beta-glucosidase 8 361 458 - -
Spst8g01627 484 Pfam Glycosyl hydrolases family 17 29 346 IPR000490 GO:0004553|GO:0005975
Spst8g01627 484 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 438 IPR044965 GO:0004553|GO:0005975
Spst8g01627 484 SMART X8_cls 365 449 IPR012946 -
Spst8g01627 484 FunFam Glucan endo-1,3-beta-glucosidase 5 28 352 - -
Spst8g01627 484 Gene3D - 361 459 - -
Spst8g01627 484 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Spst8g01627 484 Gene3D Glycosidases 28 353 - -
Spst8g01627 484 SUPERFAMILY (Trans)glycosidases 29 346 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01627 Spst-Chr8 18761375 18763987 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01627 13 481 Glycoside Hydrolase AT4G31140 69.409 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01627 K19893 - gmx:100790297 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01627 8 18761375 18763987 Spst9g01674 9 16983303 16984958 PCT
Spst9g00853 9 7505755 7509473 Spst8g01627 8 18761375 18763987 PCT