Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00853 ATGGGGTTGATGGGGAGTGGAAAGTTTGGAAGGTGTGATTTTGTTGGGGTTGTTGTGTTGGTGGTCTTGGTGGGGTCAGTGAGTGGGATTGGTGTGAATTGGGGGACACGGTCAACACACCCTTTGTCTCCTTCGAAGGTGGTGAAGATGCTGAAGGACAATGGCATTCAGAAGGTGAAGCTTTTTGATGCTGATCCTGGCATCTTGGATGCTCTCAAGAAGTCTGGGATACAGGTCATGGTGGGAATTCCCAATGACATGCTTTATACCCTTGCTAACAGTGTTGAAGCAGCTGAAAAATGGGTTTCCAAGAATGTTTCCAAACATGTATCTTCTGGAGGAGTGGATATCAGGTATGTTGCAGTGGGGAATGAACCATTCTTGTCAACATACAATGGCAGCTACGAAACCACGACGCTTCCAGCACTCCAAAACATTCAGGCAGCTCTCACAAAGTCCGGTTTGAGCAACCGTGTCAAGGTCACAGTCCCCCTAAACGCTGACGTGTACCAAAGCTCTTCAGAAAAGCCATCAGATGGCGGTTTCAGACCGGATATCAACCCTGTTATGCTACAGATTGTCAAGTTCTTGAATGACAATGGCGCACCCTTCACAGTGAACATCTACCCTTTCATCAGCCTCTACTCGGACCCCAATTTCCCTGTTGACTATGCATTCTTTAACGGCTACCAGCCCGCCATAAATGACAATGGAAGAACCTATGACAATGTGTTTGATGCTAACCATGACACTCTAGTGTGGGCACTGCAGAAGAATGGCTTTGGAAACTTGCCCATAATTGTGGGGGAAATCGGGTGGCCTACAGATGGAGACAGAAATGCAAACCTTCAATATGCACAACGTTTCAACCAAGGTTTCATGTCAAAATACATGTCTGGAAAAGGGACCCCAATGAGGCCTAGTCCTGTAGATGCTTATTTGTTTAGTCTCATAGATGAAGATGCCAAAAGCATTCAGCCAGGGAATTTTGAGCGTCACTGGGGGATGTTTTACTTGGATGGACAACCAAAATACCAACTTAATCTTGGGTCAACACGAGGCAATGGGTTAGTAGGTGCCAATGGGGTTGATCACTTGGCTAAAAAGTGGTGTGTTTTGAAACCTTCCGCAAACCTTAATGATGACCAAGTGGCACCTAGTGTGGCCTATGCTTGTCAAAATGCTGATTGCACCAGTCTTGGGTATGGAACTTCATGTGGCAATTTAGATGTGCATGGTAACATATCTTATGCGTTTAATAGCTACTACCAGGTAAATGACCAGATGGACAGTGCCTGCAAATTCCCTGGCCTTTCTATGATCACTGACAAGGATCCATCTGTGGGAGATTGCAAGTTCAGAATCATGATCCAGACAGATTCTGCAGGGCTACATGGAAAAGTTGGATCTCTAACTACAGTGCTGTTATCTTTTGTACTTTTGCTATATTGTAATCTTTGGTTTTGA 1467 0.4519 MGLMGSGKFGRCDFVGVVVLVVLVGSVSGIGVNWGTRSTHPLSPSKVVKMLKDNGIQKVKLFDADPGILDALKKSGIQVMVGIPNDMLYTLANSVEAAEKWVSKNVSKHVSSGGVDIRYVAVGNEPFLSTYNGSYETTTLPALQNIQAALTKSGLSNRVKVTVPLNADVYQSSSEKPSDGGFRPDINPVMLQIVKFLNDNGAPFTVNIYPFISLYSDPNFPVDYAFFNGYQPAINDNGRTYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFMSKYMSGKGTPMRPSPVDAYLFSLIDEDAKSIQPGNFERHWGMFYLDGQPKYQLNLGSTRGNGLVGANGVDHLAKKWCVLKPSANLNDDQVAPSVAYACQNADCTSLGYGTSCGNLDVHGNISYAFNSYYQVNDQMDSACKFPGLSMITDKDPSVGDCKFRIMIQTDSAGLHGKVGSLTTVLLSFVLLLYCNLWF 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00853 488 ProSitePatterns Glycosyl hydrolases family 17 signature. 264 277 IPR000490 GO:0004553|GO:0005975
Spst9g00853 488 SUPERFAMILY (Trans)glycosidases 30 348 IPR017853 -
Spst9g00853 488 FunFam Glucan endo-1,3-beta-glucosidase 8 365 462 - -
Spst9g00853 488 Pfam X8 domain 369 439 IPR012946 -
Spst9g00853 488 FunFam Glucan endo-1,3-beta-glucosidase 5 29 355 - -
Spst9g00853 488 Gene3D - 365 462 - -
Spst9g00853 488 Gene3D Glycosidases 29 355 - -
Spst9g00853 488 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 22 442 IPR044965 GO:0004553|GO:0005975
Spst9g00853 488 Pfam Glycosyl hydrolases family 17 30 348 IPR000490 GO:0004553|GO:0005975
Spst9g00853 488 SMART X8_cls 369 453 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00853 Spst-Chr9 7505755 7509473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00853 14 484 Glycoside Hydrolase AT4G31140 68.153 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00853 K19893 - gmx:100796552 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00853 9 7505755 7509473 Spst8g01627 8 18761375 18763987 PCT