Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01674 ATGGCTCGGGTCGAGTTCTCTATGTGGGGGTTTTGTTTTATGTTTATGTTAGCTCAATACCAAGTACAAGAAGCGCAAGGTGCAGAGTCTGTACCTGGTCTTGGCATCAATTGGGGTGCATTAGCATCCCACCCTTTGAATCTTAACATTGTGGTAAATATGTTGAAGGATAATGGGATCAAGAAAGTTAAACTTTTCGATGCAGATCCTTGGACAGTGAGTGCTTTGTCTGGTACAGACATAGAAGTCATGGTGGGAATTCCTAATGATCAATTGAGTAAATTTGCTGGAAGTAGCCATAATGCAGAACATTGGGTGAAAGCAAACATCACCAAACGTCTTCATGGTCATCATGGGGCCGTGAAAATCAGACCACATTCCCAGCAATGCAAAATATTGGCCATCGACAAGGCTGGTCTTGGAGACACAGTGAAGGTTACTACTGCTTTAAATGCTGATGTTTATGAGTCTTCTTCAGGCAAGCCATCAGATGGAAATTTTCGGAGTGACATTGGTGACGATATAAAACAAATACTGAGTTTCCTTCACGAAAGAAACTCACCATTTCTTGTCAACATATACCCTTTCCTTAGTCTCTACCAGGATGACAATTTTCCAGAAGAATTTGCCTTCCTTGACGGTCAAGGCAGAATAGTTCAAGACAAAAACGTGCAATATAGCAACGTGTATGACGCAAATTTAGACACCCTTGTTTGGTCATTGAGAAAAGCTGGTTACCCTGACATGAGAATCGTGGTTGGTGAAATTGGATGGCCAACTGATGGTGACAAAAATGCTAATAACAAGAATGCAAAAAGGTTCTACGAAGGGCTACTCAAGAAAATGGGACAGGATAAATGGCCTATTGCTGCTAAAGGTGTCGTGTACCAAGAACGTAAATGGTGTGTCCTAAACAGTGATGTTAAGAACTTGAGCCTTGTACCAAGTGCACTAGACTATGCTTGTGCTGGTGCTGATTGCACAAGCTTAGGATTTGGTTGTTCATGCGAAAATTTAGACCTGGCTACCAATGCTTCATATGCTTTCAACCAGTACTTTCAATCAAAGGGACCAAAAGTTGAGGCTAAGCTTGTAATTTCAATGGATTAG 1110 0.4144 MARVEFSMWGFCFMFMLAQYQVQEAQGAESVPGLGINWGALASHPLNLNIVVNMLKDNGIKKVKLFDADPWTVSALSGTDIEVMVGIPNDQLSKFAGSSHNAEHWVKANITKRLHGHHGAVKIRPHSQQCKILAIDKAGLGDTVKVTTALNADVYESSSGKPSDGNFRSDIGDDIKQILSFLHERNSPFLVNIYPFLSLYQDDNFPEEFAFLDGQGRIVQDKNVQYSNVYDANLDTLVWSLRKAGYPDMRIVVGEIGWPTDGDKNANNKNAKRFYEGLLKKMGQDKWPIAAKGVVYQERKWCVLNSDVKNLSLVPSALDYACAGADCTSLGFGCSCENLDLATNASYAFNQYFQSKGPKVEAKLVISMD 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01674 369 Pfam X8 domain 300 360 IPR012946 -
Spst9g01674 369 SMART X8_cls 300 364 IPR012946 -
Spst9g01674 369 Gene3D Glycosidases 33 297 - -
Spst9g01674 369 SUPERFAMILY (Trans)glycosidases 34 291 IPR017853 -
Spst9g01674 369 ProSitePatterns Glycosyl hydrolases family 17 signature. 249 262 IPR000490 GO:0004553|GO:0005975
Spst9g01674 369 Pfam Glycosyl hydrolases family 17 34 284 IPR000490 GO:0004553|GO:0005975
Spst9g01674 369 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 356 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01674 Spst-Chr9 16983303 16984958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01674 28 362 Miscellaneous Gene Families AT5G64790 43.204 7.29e-106 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01674 - - gmx:100794658 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01674 9 16983303 16984958 Spst9g01674 9 16983303 16984958 ECH
Spst8g01627 8 18761375 18763987 Spst9g01674 9 16983303 16984958 PCT