Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01017 ATGGCTGTTCAAAACTCTCTCCAAATAACTAGAAGTGGTACCGGTGATTATGATGATGATGGGCATGCCAAGAGGACTGGAACTGTATGGAGTGCTGTGGCTCATATAATCACAGCGATTATTGGTGCTGGTGTTCTGTCTCTGGCATGGAGTACTTCCCAATTGGGATGGATTGCAGGACCAGTTTTCTTGCTTTTTTGTGCAATGGTCACGTGTATTTCTTCATTCCTTCTTTCCGATTGTTACAGAACTCTAGATCCTGTAACTGGGAAAAGAAACTACACTTACATGGATGCTGTTAGAATCTATCTTGGAAATAGAAGGAAATGGTTGGCTGGTTTCCTTCAATATTTGAGCTTGTATGGGGTTAGTACTGCTTATGTAATTACCACAGCAACCTGTCTGAGAGCGATACTGAAATCAAATTGTTATCACAAGGAAGGGCATCAGGCTACTTGTAAATATGGGGATACAGTATACATGATGCTGTTTGGACTAGTTCAGATCATAATGTCATTCATACCAGATCTCCACAACATGTCATGGGTTTCAATTGTTGCGGCCATAATGTCCTTTACATATTCAACTATTGGACTTGGACTTGGCATCACAACAGTAATAGAAAATGGAAGAATTATGGGGAGTTTAACAGGAGTACCGGCTGCAAATATTGCTGACAAGTTATGGTTAGTCTTCCAAGCAATTGGTGATATTGCCTTTGCCTATCCATACACAGTCATCCTCCTTGAGATACAGGACACTCTAGAGTCTCCTCCACCAGAAAACAAGACCATGAAAAAGGCCTCCATAATTGCTATCCTCCTTACAACATTCTTCTACCTCTGTTGTGGATGCTTTGGATATGCAGCTTTTGGAAATCAGACACCAGGGAACCTCTTGACAGGGTTTGGGTTTTATGAGCCTTACTGGCTCATTGACTTTGCCAACGCTTGCATTGTTCTTCACTTGGTAGGAGGATATCAGATTTTCTGTCAGCCGATATATGGTGCCGTTGACAGATGGTGTTCAAAAAAATACCCCAACAATGGCTTTGTGAATAATTTCTACCAATTGAAACTGCCTTGGTTGCCAGCTTTTCAGCTAAACTTGTTCAGGATATGCTTTAGAACAGCCTATGTGATTTCCACAACTGGACTTGCGATCCTATTTCCTTACTTTAATCAAGTTCTAGGAGTGCTAGGAGCCTTGGGCTTTTGGCCATTGGCTATATATTTCCCGGTAGAGATGTACTTTGTGCAGAGGAAAATTGAAGCTTGGTCTAGAAAATGGATTGTCTTTAGAACTTTCAGCTTTATTTGCTTTCTTGTGTCACTACTGGGTCTCGTTGGATCCCTTGAAGGAATCATAAGCGCGAAACTAAGCTAA 1386 0.4141 MAVQNSLQITRSGTGDYDDDGHAKRTGTVWSAVAHIITAIIGAGVLSLAWSTSQLGWIAGPVFLLFCAMVTCISSFLLSDCYRTLDPVTGKRNYTYMDAVRIYLGNRRKWLAGFLQYLSLYGVSTAYVITTATCLRAILKSNCYHKEGHQATCKYGDTVYMMLFGLVQIIMSFIPDLHNMSWVSIVAAIMSFTYSTIGLGLGITTVIENGRIMGSLTGVPAANIADKLWLVFQAIGDIAFAYPYTVILLEIQDTLESPPPENKTMKKASIIAILLTTFFYLCCGCFGYAAFGNQTPGNLLTGFGFYEPYWLIDFANACIVLHLVGGYQIFCQPIYGAVDRWCSKKYPNNGFVNNFYQLKLPWLPAFQLNLFRICFRTAYVISTTGLAILFPYFNQVLGVLGALGFWPLAIYFPVEMYFVQRKIEAWSRKWIVFRTFSFICFLVSLLGLVGSLEGIISAKLS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01017 461 PANTHER OS05G0424000 PROTEIN-RELATED 27 455 - -
Spst8g01017 461 Pfam Transmembrane amino acid transporter protein 25 456 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01017 Spst-Chr8 8817128 8819716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01017 17 456 Organic Solute Cotransporters AT5G09220 53.499 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01017 K24917 - gmx:100786621 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01017 8 8817128 8819716 Spst8g01017 8 8817128 8819716 ECH
Spst6g00021 6 491067 492216 Spst8g01017 8 8817128 8819716 PCT
Spst8g01017 8 8817128 8819716 Spst6g00020 6 482164 485286 PCT