Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00020 ATGGATGGGAAAAACTCTCTACAAATAACTAGAAGTGGTACGGGTGACTATGATGATGATGGACATGCCAAAAGGACTGGGAATTTGAAGAGTGCTGTAGCTCATATCATCACTGCTGTTATTGGTTCTGGTGTTCTTTCTCTTGCATGGAGCACTTCCCAGTTAGGCTGGATTGGAGGGCCAGTTGCCCTGCTTTGTTGTGCAATTGTCACCTATATTTCTTCATTCCTCCTGTCTGATTGCTACAGAACTCCTGATCCTGTAACTGGGAAAAGAAACTACTCTTACATGGATGCTGTTAGAATTTTTCTTGGTAATAAAAGAACATGGATAGCTGGCTTCCTTCAATTTTTGACTTTATATGGGACTGCTATTGCATATGTACTAACCACAGCAACAAGTCTGAGGGCAATTCTGGCCTCAAATTGTTATCACAAGAAAGGGCATGAAGCTCCTTGTAGATATGGGGGTAATATGTATATGGTGATGTTTGGAGTTGTTCAAATCGTAATGTCGTTCATACCGGATCTCCATAACATGGCATGGGTTTCAGTCGTTGCGGCAATTATGTCCTTTACATACTCATTCATTGGACTAGGACTTGGCATAGCAACAGTCATAAAAAATGGAAGAATAATGGGGAGCTTCACAGGAGTACCAACCGATAAAATTGCTGACAAATTTTGGTTAATCTTCCAAGCACTTGGTGACATTGCCTTCTCCTATCCATACTCCATTCTCCTTCTTGAGATCCAGGACACTCTAGAGTCTCCTCCACCAGAAAATCAGACCATGAAAAAGGCCTCAATGGTTGCAATCTTCATTACAACATTCTTCTACCTGTGCTGTGGATGCTTTGGATATGCAGCTTTTGGTAATGCCACACCAGGAAACCTCTTGACTGGGCTTTTGGACGGATCTGGTTTTTTTGAGCCTTTCTGGCTCATTGACCTTGCTAATGTTTGCATCATTATTCATTTGGTGGGAGGATATCAGATTTACAGTCAACCTGTATACAGTACTGCTGATAGATGGGCTTCAAGAAAATTCCCCAACAGTGGCTTTGTGAACAATTTCTACAAAGTGAAACTGCCTTTACTGGGTGGTTTTCAGCTAAACCTTTTCAGGTTCTGTTTTAGGACAGCCTACGTGATTTCAACAGTTGGTTTTGCAGTCTTGTTTCCTTACTTCAACCAAATTCTTGGAGTGTTAGGAGCCATAAACTTCTGGCCATTGGCTATATACTTCCCCGTTGAGATGTACTTTATACAGCACAAAATTGCAGCTTGGAGTAGAAAATGGATTGTTCTCAGAACATTCAGCTTTGCATGTTTTCTTGTCTCTGTAGTGGGCTTAGTTGGATCCATTGAAGGCATTGTAAAAAAGAAAACTAGCTGA 1398 0.4127 MDGKNSLQITRSGTGDYDDDGHAKRTGNLKSAVAHIITAVIGSGVLSLAWSTSQLGWIGGPVALLCCAIVTYISSFLLSDCYRTPDPVTGKRNYSYMDAVRIFLGNKRTWIAGFLQFLTLYGTAIAYVLTTATSLRAILASNCYHKKGHEAPCRYGGNMYMVMFGVVQIVMSFIPDLHNMAWVSVVAAIMSFTYSFIGLGLGIATVIKNGRIMGSFTGVPTDKIADKFWLIFQALGDIAFSYPYSILLLEIQDTLESPPPENQTMKKASMVAIFITTFFYLCCGCFGYAAFGNATPGNLLTGLLDGSGFFEPFWLIDLANVCIIIHLVGGYQIYSQPVYSTADRWASRKFPNSGFVNNFYKVKLPLLGGFQLNLFRFCFRTAYVISTVGFAVLFPYFNQILGVLGAINFWPLAIYFPVEMYFIQHKIAAWSRKWIVLRTFSFACFLVSVVGLVGSIEGIVKKKTS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00020 465 Pfam Transmembrane amino acid transporter protein 26 459 IPR013057 -
Spst6g00020 465 PANTHER OS05G0424000 PROTEIN-RELATED 31 456 - -
Spst6g00020 465 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00020 Spst-Chr6 482164 485286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00020 6 447 Organic Solute Cotransporters AT1G77380 51.910 2.94e-175 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00020 K24917 - gmx:100818535 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01017 8 8817128 8819716 Spst6g00020 6 482164 485286 PCT