Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00021 ATGGATGTGAGAAACTCAATCCAGATTACTACAAGTCAAAGTCAACGTGGTGCTTATGATGACGATGGCCATGCTAAAAGGACAGGAAATTTATGGAGTGCTGTAGCTCATATCATCACTGCTGTTATTGGTTCTGCTGTTCTTTCTCTTGCATGGAGCACTTCCCAGTTGGGCTGGATTGGAGGGCCACTTGCATTGCTTTGTTTTGCAATCATCACCTATATTTCTTCATCCCTCCTTTCTGATTGTTATCGAAACCCAGATCCTCTCACTGGGAAAAGAAGCTGTTCATTCATTGATGCTGTTAGAGTGAATCTTGGTGAAAGAAACACATGGTTGGCTGGTTTCCTTCAGTTTTTCACTTTGGCAATTCTGGAAGCAAACTGTTATCACAAGGAAGGGCATGAAGCTCCTTGTACTTATGGGGGTACAATTTATATGGTGATGTTTGGAGTTGTTCAAATTGTAATATCATTCATACCAGACCTCCATAACATGCTATGGGTCTCAGTTCAGGCGGCAGCTATGTCCTTTACATACTCTTTCATTGGACTAGGACTTGGCATAGCAAAAGTCATAGAAAATGGAAGATTTATGGGGAGCATAACAGGAATACCAGCTACTAACACTGCTAACAAGTTATGGTTAGTCTTCCAAGCACTTGGTGACATTGCTTTTGCTTATCCATTTGCCTTGCTGCTTCTTGAGATTCAGATACATTGA 723 0.4136 MDVRNSIQITTSQSQRGAYDDDGHAKRTGNLWSAVAHIITAVIGSAVLSLAWSTSQLGWIGGPLALLCFAIITYISSSLLSDCYRNPDPLTGKRSCSFIDAVRVNLGERNTWLAGFLQFFTLAILEANCYHKEGHEAPCTYGGTIYMVMFGVVQIVISFIPDLHNMLWVSVQAAAMSFTYSFIGLGLGIAKVIENGRFMGSITGIPATNTANKLWLVFQALGDIAFAYPFALLLLEIQIH 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00021 240 MobiDBLite consensus disorder prediction 1 18 - -
Spst6g00021 240 Pfam Transmembrane amino acid transporter protein 28 238 IPR013057 -
Spst6g00021 240 PANTHER OS05G0424000 PROTEIN-RELATED 29 238 - -
Spst6g00021 240 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00021 Spst-Chr6 491067 492216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00021 20 238 Organic Solute Cotransporters AT1G77380 51.055 1.04e-79 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00021 K24917 - gmx:100816934 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00021 6 491067 492216 Spst6g00021 6 491067 492216 ECH
Spst6g00021 6 491067 492216 Spst8g01017 8 8817128 8819716 PCT