Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00989 ATGGGGAGTGGTGAAGAGAACTCACTGTTTGAGACTAGCAAAGACAGAGCAAGGCACATTCGTAGGGTCTATGCTGTCTCTATGTTTGTAGCTATATGCTTCGTCTGGACATTCAGATTGAAGCACGTACCAGCAAAAGGGGAACCAGGGCAATGGGCTTGGCTTGGTTTGTTTGCTGCAGAACTGTGCTCTGGCATCTATTGGGTCTTCTATCAAACCCTCCGCTGGAACATGGTCTACAGAAAAACCTTCCCCGACAGACTCTCCCAGAGATATGAAAGTAAGTTGCCGGGAGTGGACATATTTGTGTTTACGGCAGATCCAGTGGTTGAGCCACCCGTGATGGTGATAAATACTGTCTTATCTGCGATGGCTTACGACTATCCAACTGAGAAGCTGAGTGTGTATCTCTCAGATGATGCTGCCTCAGATGTAACTTTTTATGCTCTTTTGGAGGCTTCTAACTTTGCCAAGCATTGGGTGCCATTCTGCAAGAGATTTAAGCTCGAACCGAGGTCACCTTCTGCCTTTTTTAACACCCTTCTCTCAACAAAATCACACGACCATGACTATGTCAAGCACTTGGCAACCATCCAGAAATTATACGAAGAAATGAAAAGGCGAATAGAAGATGCAACCAAGTTAGGAGTACCCAGTGAAGCACGGTCAAAGCATAATGGATTTTCCCAATGGGATTCGTACTCCTCTCGACGTGATCACGACACTATCCTTCAAATACTGGTGCATAAAAACGAGTCGCAAAACTCGAAGGATGTAGAAGGATGCATTTTGCCAACCCTAGTTTACGTGGCTCGCGAGAAGAGACCTCAATATCACACCCACTACAAAGCCGGAGCTGTAAATTCATTGCTAAGAGTGTCTTCAAAGATTAGCAAAGGGAAAATTATTCTATTTCTCGATTGTGACATGTACTCAACCAATTCGCAATCAGTGAGAGAAGTTCTATGTTTTTTCATGGATGAAGATAAAGGCCAAAAGATTGCATATGTGCAATGTCCACAATATTTTCATAATATTGGTAAAAATGATCTATACGCGAATGCTGTATCAGAAACTTTGCAGATACACCTCCATGGTGAAGATGGTTTGGGTGGCTCTTTGTTTATTGGAACTTGTTGCTTTCTTAGAAGAGATGCTTTTTGTGGGAAGAAGTTTAGTCCTGAATGGGAAAATGATTGGAATGATGAGAACGAGAAACATCAGTTGAGTGAAGTAAAGTTGCATGAACTCGAAGAAGAATCGAAGGCTTTAGCAAGTTGCACCTACGAAAAAAATACTTTATGGGGAAAGAAGATTGGTTCAGTATATGGATGTCTTGTGGAGGATGTGATAACAGGGTTTCGGATACAATCACAAGGATGGAGATCAGTGTGCTACAACCCTCCGAGAAAGTGTTTTATAGGTGTTGCACCAACTAACTTGCTTCAAACACTGGTTCAACATAAGAGATGGGTTCAAGGTGACATGCAAATCTTGTTATCTGAGTACAGACCTACATGCTTTGGTGATAGAAAGATCAATTTCCTCCAACTATTGGCATATCTGTACACTGTCTGTTTTTCAATCATTTCCTTGCCAATGCTATATTACTCCATCATCCCTTCACTTTATCTCCTCAAGGGCATTTCCTTGTTTCCAGAGATGTCTAGCTCATGGTTCATACCTTTCGCATGTGTAATTGTTGGGAATACTACTTATAGTTTGATCGAGGGTTTGAGTATCGGAGCATCAATCAGAGGTTGGTGGAATGCTATGAGAATGTGGTTGTACTTGAGAACAAGTGCCTTTTTCTTTGCCTTCATAGACGCCATCTTCGAACACTTTGGACGTGCAAATTCATCCTTTGTAGTCACAGCAAAGACCATAGAAGATGATGCTGCCCAACGTTACGAGAAAGAGATCATGGAGTTTGGAACCTCTTCTCCGTATTTCACTGTTCTGGCAACACTCGCATTGCTCAATTTGTTTTGTTTGCTTGCAACTTTAAAGGACTTGGTCCTTGGAAATGGTGCCTTTGATGCTGAGAAAATGGTACTGCAACTTCTCTTGTGCGTAGTATTGGTTCTCATCAATTTTCCCCTATACGAAGCCATTTTTATAAGGAAGGATAAGGGTAGATTGCCAACCTCTCTTTCTATCAAGTCTACTACATTGGCTTTCACTGCATGCGTCTTCTTCAAACTGTTCAACTGA 2214 0.4201 MGSGEENSLFETSKDRARHIRRVYAVSMFVAICFVWTFRLKHVPAKGEPGQWAWLGLFAAELCSGIYWVFYQTLRWNMVYRKTFPDRLSQRYESKLPGVDIFVFTADPVVEPPVMVINTVLSAMAYDYPTEKLSVYLSDDAASDVTFYALLEASNFAKHWVPFCKRFKLEPRSPSAFFNTLLSTKSHDHDYVKHLATIQKLYEEMKRRIEDATKLGVPSEARSKHNGFSQWDSYSSRRDHDTILQILVHKNESQNSKDVEGCILPTLVYVAREKRPQYHTHYKAGAVNSLLRVSSKISKGKIILFLDCDMYSTNSQSVREVLCFFMDEDKGQKIAYVQCPQYFHNIGKNDLYANAVSETLQIHLHGEDGLGGSLFIGTCCFLRRDAFCGKKFSPEWENDWNDENEKHQLSEVKLHELEEESKALASCTYEKNTLWGKKIGSVYGCLVEDVITGFRIQSQGWRSVCYNPPRKCFIGVAPTNLLQTLVQHKRWVQGDMQILLSEYRPTCFGDRKINFLQLLAYLYTVCFSIISLPMLYYSIIPSLYLLKGISLFPEMSSSWFIPFACVIVGNTTYSLIEGLSIGASIRGWWNAMRMWLYLRTSAFFFAFIDAIFEHFGRANSSFVVTAKTIEDDAAQRYEKEIMEFGTSSPYFTVLATLALLNLFCLLATLKDLVLGNGAFDAEKMVLQLLLCVVLVLINFPLYEAIFIRKDKGRLPTSLSIKSTTLAFTACVFFKLFN 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00989 737 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 9 723 - -
Spst8g00989 737 Coils Coil 195 215 - -
Spst8g00989 737 SUPERFAMILY Nucleotide-diphospho-sugar transferases 114 542 IPR029044 -
Spst8g00989 737 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 397 IPR029044 -
Spst8g00989 737 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 174 IPR029044 -
Spst8g00989 737 Pfam Cellulose synthase 99 390 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst8g00989 737 Pfam Cellulose synthase 417 732 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00989 Spst-Chr8 8610724 8614088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00989 9 730 Glycosyltransferase AT1G55850 51.099 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00989 - - gmx:112999362 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01894 6 18122572 18128397 Spst8g00989 8 8610724 8614088 PCT
Spst8g00989 8 8610724 8614088 Spst6g01899 6 18154992 18159620 PCT