Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01899 ATGGCAGAGGAGGAGAATAGTCCGTTGTTTGAGATAAAGAGAGCAAAAGGAAGGGTCTTTTACAAAGTCTTATGTTTGTCATTGTTTGTGGGGATATGCTTCATCTGGGTTTTCAGAGTGAGTCACATGCCCAGAGAAGGTGAAGATGGAAGATGGGGTTGGATTGGGATGTTCTGTGTTGAACTATGGTTTGGTCTTTACTGGCTCCTCAGACACTCCTTAAGATGGAACCTTCTCTTCAGGGAACCTTTCAGAGATAGACTATCACAAAGGTATGAGAAGGTGTTGCCAAAAGTGGATATATTTGTGTGCACAGCAGATCCAGTGATAGAGCCAGCAGTGATGGTGATAAACACAGTGTTATCAGTTATGGCTTATGATTATCCACCAGACAAACTCAGTGTGTATCTTTCAGATGATGCTGCATCAGACATTACCTTCTATGCTCTCTTTGAGGCTTCCATCTTTGCCAAACAATGGCTTCCTTTCTGCAGAAAATTCAAGGTCGACCCCACCTCACCTGCTGCTTATTTCAAGACCATTGCCTCGTCAACTCATTCAAGTTCTCATGCCAAAGAATTACTCACAATCAAGAAATTATACCAAGATATGGAAAGTCGCATAGAAAATGCAGGCAAGATGGAGAGAGTACCTGAAGAACTACACTCAAAGCATAAAGGATTTTCTGCTTGGGATTCATATTATTCTCGACCAGACCATGACACAATTCTTCAAATATTACTTGATGGAAAGGACTCGAGTGCCAAAGATGTAGATGGGAATGTTATGCCCATATTGGTTTATTTGGCTCGCGAGAAGAGACCTCAGGTTCCACATGACTTCAAAGCTGGAGCCATGAATTCATTGATAAGAGTGTCATCAATGATTAGCAACGGGGAAATTATCCTTAATACTCCACAGTGTTTTGAGAACATCACGAAGAATGATGTCTATGGTTGTGCTTTAAGAGTAGTTTATGAGGTGGAACTCCATGGTGCAGATTCACTTGGTGGACCAATGTATATTGGAACTGGCTGCTTTCACAGAAGAGAGATACTGTGTGGAAGAAAGTTCAGTGACCAATACAAGAAAGATTGGAATGAATGCAAGAATATTGATCATATGAAAGAAGCAAGCTTGCATGAACTGGAAGAAAAATCAAAGGCTCTTGCTAGTTGTACCTATGACAAAAACACTTTATGGGGAAAAGAGATGGGACTGCAATATGCTAACTCAATAGAGGATCTGATGACAGGATTGTCTATTAAATGCAGAGGATGGAAATCAGCATACTATAATCCTCGAAGGAGTGCTTTCTTAGGTGTAGCTCCAACCACCTTGCCACAAGCCTCCAAATGGCATACTGTTACCATAACCTATGGGTGTTTCTTTCCTGGCCAACTCTATATTACTGCATCATCCCTTCACTCTATCTCCTCAAAGGCATTCCCTTGTTTCCACAGGTATGAATTTGACACCTTGGCTGCACAAATGTCAAGTCCATGGTTTATACCCTTTGCATATGTCATGCTTGGCGATTCCTCCTACTGCCCGATGGAGTTTTTGTGGTCAGGAGGCACAGTCAAGGGTTGGTGGAATGACCTACGGATGTGGCTATACAAGAGAACAAGCTCTTACCTTTTTGCTTCTGTTGATACCATCATGAAGCTTTTTGGCTTTTCAGAATCAACCTTCGTAGTATCTGCAAAGGTAGCAGAAGAAAATGTTTCCCAATGA 1737 0.4174 MAEEENSPLFEIKRAKGRVFYKVLCLSLFVGICFIWVFRVSHMPREGEDGRWGWIGMFCVELWFGLYWLLRHSLRWNLLFREPFRDRLSQRYEKVLPKVDIFVCTADPVIEPAVMVINTVLSVMAYDYPPDKLSVYLSDDAASDITFYALFEASIFAKQWLPFCRKFKVDPTSPAAYFKTIASSTHSSSHAKELLTIKKLYQDMESRIENAGKMERVPEELHSKHKGFSAWDSYYSRPDHDTILQILLDGKDSSAKDVDGNVMPILVYLAREKRPQVPHDFKAGAMNSLIRVSSMISNGEIILNTPQCFENITKNDVYGCALRVVYEVELHGADSLGGPMYIGTGCFHRREILCGRKFSDQYKKDWNECKNIDHMKEASLHELEEKSKALASCTYDKNTLWGKEMGLQYANSIEDLMTGLSIKCRGWKSAYYNPRRSAFLGVAPTTLPQASKWHTVTITYGCFFPGQLYITASSLHSISSKAFPCFHRYEFDTLAAQMSSPWFIPFAYVMLGDSSYCPMEFLWSGGTVKGWWNDLRMWLYKRTSSYLFASVDTIMKLFGFSESTFVVSAKVAEENVSQ 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01899 578 Pfam Cellulose synthase 306 369 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst6g01899 578 Pfam Cellulose synthase 387 448 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst6g01899 578 Pfam Cellulose synthase 99 304 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst6g01899 578 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 178 IPR029044 -
Spst6g01899 578 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 7 304 - -
Spst6g01899 578 FunFam Cellulose synthase isolog 89 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01899 Spst-Chr6 18154992 18159620 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01899 3 568 Glycosyltransferase AT1G55850 47.293 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01899 - - gmx:100785532 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00989 8 8610724 8614088 Spst6g01899 6 18154992 18159620 PCT