Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01894 ATGGCAGAGAAGGAGCATAGTCCATTGTTTGAGACAAAGAGAGCAAAAGGAAGAGTCTTTTACAAAGTGTTTAGTTTGTCACTGTTTGTGGGGATATGCTTCATCTGGGTTTACAGAGTGAGTCACATACCCAGAGAAGGTGAAGATGGAAAATGGGGTTGGATTGGGATGTTCTGTGTTGAACTATGGTTTGGTCTTTACTGGCTCCTCAGACACCCTTTCAGATGGAACCCTCGGTTCAGAGAACCTTTCAGAGATAGACTATCACAAAGGTATGAGGAGGTGTTGCCAAAAGTGGACATATTTGTGTGCACAGCAGATCCAGTGATAGAGCCAGCAGTGATGGTGATAAACACAGTGTTATCAGTTATGGCTTATGATTATCCACCAGACAAACTCAGTGTGTATCTTTCAGATGATGCTGCATCAGACATTACCTTCTATGCTCTCTTTGAGGCTTCCATCTTTGCCAAACAATGGCTTCCTTTCTGCAGAAAATTCAAGGTCGACCCCACCTCACCTGCTGCTTATTTCAAGACCATTGCCTCGTCAACTCATTCAAGTTCTCATGCCAAAGAATTACTCACAATCAAGAAATTATACCAAGATATGGAAAGTCGCATAGAAAATGCAGGCAAGATGGGAAGAGTACCTGAAGAACTACACTCAAAGCATAAAGGATTTTCTGCTTGGGATTCTTATTCTTCTCGATCAGACCATGACACAATTCTTCAAATATTACTTGATGGAAAGGACTCGAGTGCCAAAGATGTGGATGGGAATGTTATGCCTATATTGGTTTATTTGGCTCGCGAGAAGAGACCTCAAGTTCCACATAACTTCAAAGCTGGAGCCATGAATTCATTGTTAAGAGTGTCATCAATGATTAGCAACGGGGAAATTATCCTTAATGTAGATTGTGACATGTACTCAAACAATTCCCAGTCTCTAAGGGATGCACTTTGCTTCTTAATGGATGAAGATCAAGGCCGTGAAATTGCCTTTGTGCAGACTCCACAGTGTTTTGAGAATATCACGAAGAATGATATATATGGTGGTGCTCTGCAAGTAGTTTATGCGATGGAATTCCATGGTATGGATGCACTTGGTGGGCCTCTGTATATTGGAACTGGCTGCTTTCACAGAAGAGAGATACTGTGTGGAAGAAAGTTCAATAACCAATACAAGAAAGATTGGAATGGATGCAAGAATATTGATCATATGAAAGAAGCAAGCTTGCATGAACTGGAAGAAAAATCAAAGGCTCTTGCTAGTTGTACCTATGAGAAAAACACTTTATGGGGAAAAGAGATGGGACTGTTATATGGCTGCTCAGTAGAGGATGTGGTGACAGGATTGTCTATTAAATGCAGAGGATGGAAATCAGTGTACTATAATCCTCAAAGGAGTGCTTTCTTAGGTGTAGCTCCAACCACCTTGCCACAAGTACTAGTTCAACATAAGAGATGGTCTGAAGGAGGCTTTCAAGTTTTGCTTTCTAAGTATAGTCGTGCATGGTATGCTTATGGATTCATCAATCCAGGCCTCCGAATGGCATATTGTTACTATAACCTATGGGTGACTCTTTCTTGGCCAACTCTCTATTACTGCATCATCCCTTCACTCTATCTCCTCAAAGGCATTCCCTTGTTTCCACAGATGTCAAGTCCATGGTTTATACCCTATGCATATGTCATGCTTGGCGATTCCTCTTACTGCCTGATGGAGTTTTTGTGGTCAGGAGGCACAGTCAAGGGTTGGTGGAATGACCTACGGATATGGCTATACAAGAGAACAAGCTCTTACCTCTTTGCTTTCGTAGATACCATCTTGAAGATTTTTGGATTTTCAGAATCAACCTTTATAGTATCTGCAAAGGTGGCAGAAGAAAATGTTTCCCAACGATATGAGAAAGAAGTCATGGAGTTTGGAAACTCATCCCCAATGCTGACTTTACTAGCAACACTTGCATTGCTCAATTTGTTTTGCCTTCTTGGCACCTTCATAAAGCAAGTGTTCATCATTGAAGGGGGTCTCAGAATTTTTGACACAATGGCATTGCAAGTTCTACTAAGTGGGGTTTTGGTTCTCATCAACATACCTGTGTACCAAGGACTCTTCCTAAGAAAAGACAAGGGAAGATTACCAATATCTGTTGCAGTTCAATCCACAACATTGGCTCTAAGTGCATGTGTCCTCTTCATTTCCACACGTTAG 2217 0.4145 MAEKEHSPLFETKRAKGRVFYKVFSLSLFVGICFIWVYRVSHIPREGEDGKWGWIGMFCVELWFGLYWLLRHPFRWNPRFREPFRDRLSQRYEEVLPKVDIFVCTADPVIEPAVMVINTVLSVMAYDYPPDKLSVYLSDDAASDITFYALFEASIFAKQWLPFCRKFKVDPTSPAAYFKTIASSTHSSSHAKELLTIKKLYQDMESRIENAGKMGRVPEELHSKHKGFSAWDSYSSRSDHDTILQILLDGKDSSAKDVDGNVMPILVYLAREKRPQVPHNFKAGAMNSLLRVSSMISNGEIILNVDCDMYSNNSQSLRDALCFLMDEDQGREIAFVQTPQCFENITKNDIYGGALQVVYAMEFHGMDALGGPLYIGTGCFHRREILCGRKFNNQYKKDWNGCKNIDHMKEASLHELEEKSKALASCTYEKNTLWGKEMGLLYGCSVEDVVTGLSIKCRGWKSVYYNPQRSAFLGVAPTTLPQVLVQHKRWSEGGFQVLLSKYSRAWYAYGFINPGLRMAYCYYNLWVTLSWPTLYYCIIPSLYLLKGIPLFPQMSSPWFIPYAYVMLGDSSYCLMEFLWSGGTVKGWWNDLRIWLYKRTSSYLFAFVDTILKIFGFSESTFIVSAKVAEENVSQRYEKEVMEFGNSSPMLTLLATLALLNLFCLLGTFIKQVFIIEGGLRIFDTMALQVLLSGVLVLINIPVYQGLFLRKDKGRLPISVAVQSTTLALSACVLFISTR 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01894 738 SUPERFAMILY Nucleotide-diphospho-sugar transferases 114 537 IPR029044 -
Spst6g01894 738 Pfam Cellulose synthase 420 736 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst6g01894 738 Pfam Cellulose synthase 99 400 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst6g01894 738 FunFam Cellulose synthase-like protein E1 232 403 - -
Spst6g01894 738 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 7 721 - -
Spst6g01894 738 FunFam Cellulose synthase isolog 89 187 - -
Spst6g01894 738 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 236 394 IPR029044 -
Spst6g01894 738 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 177 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01894 Spst-Chr6 18122572 18128397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01894 3 731 Glycosyltransferase AT1G55850 56.309 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01894 - - gmx:100785532 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01894 6 18122572 18128397 Spst6g01894 6 18122572 18128397 ECH
Spst6g01894 6 18122572 18128397 Spst8g00989 8 8610724 8614088 PCT