Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00545 ATGGTTTCCAAAGAGCAAAAGAGAGCAGCACTGCATGAGCAGCTGCAACATCTTCGTTCTCTTACTAACTCTCATGCTCTAAACAAAACCTCGATCATTGTTGATGCATCGAAGTATATTGAAAAGTTAAAGCAAAAGGTAGAAAGACTGAATCAAGAGATAGTCTCTGCAGAAACTTCAAGTGTGCATGACCCCTTGCCTATGGTTACAGTAGAAACCTTAGAAAAGGGATTTCTTATAAATGTTTTCTCTGCAAAAGGGTGTTCAGGTCTGCTTGTTTCCATATTGGAGGTCTTCGAAGAGATGAGACTCACGGTACTGGAAGCTAGGGTTTCTTGTACAGACACTTTCCGATTTCAAGCTGTTGGAGAGAATGAAGAACAAGGAGAGATCATTGATGCACATACTGTCAAACAAGCTGTGGGACAAGCAATAAAAAACTGGAGCAAAAGTGGCGATCAAGATTAA 468 0.406 MVSKEQKRAALHEQLQHLRSLTNSHALNKTSIIVDASKYIEKLKQKVERLNQEIVSAETSSVHDPLPMVTVETLEKGFLINVFSAKGCSGLLVSILEVFEEMRLTVLEARVSCTDTFRFQAVGENEEQGEIIDAHTVKQAVGQAIKNWSKSGDQD 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00545 155 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 57 IPR036638 GO:0046983
Spst8g00545 155 Coils Coil 33 60 - -
Spst8g00545 155 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 4 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00545 Spst-Chr8 5145306 5146753 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00545 - - gmx:100306253 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00545 8 5145306 5146753 Spst8g00545 8 5145306 5146753 ECH
Spst1g00849 1 10842337 10843992 Spst8g00545 8 5145306 5146753 ECH
Spst6g00167 6 1797767 1799180 Spst8g00545 8 5145306 5146753 ECH
Spst8g00545 8 5145306 5146753 Spst8g00545 8 5145306 5146753 PCT