Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00167 ATGGTTTCAAGGATTCACAAGAGAACAGCCATGTACAGGAACCTACAACTGCTTCGTTCAATCAGATACTCTCACTCGCGACCTAAAGCCTCAGTGTTATTGGATGTGTCAAATTACATACAGTGTTTGAAGAAAAAGTTGCAAGAGTTGAACCAATTAACAGTTGCAACGGCTTGGAAAAACGCTGACTATGATCCAATGCCTAAGCTTGAAGTTGAAACGCAGGAAGAGGGTTTTGTGATAAAGGTGCTGAGTCAAAGGAGTTGTCAGGGGTTGTTGGTGTTTATATTGGAAGCCTTTGAAGAGCTGGGTCTTGATGTGCTCCAGGCTAGGGTTTCTTGTGCAGACAGCTTCAGTTTAGAAGCTTTAGGAAACAAAGAGAACAATGAAGATAGTAATCCTTTGGATGCACAACTAGTTGAACAAGTAGTGTCTCAAGCTATTCAAAACTGGAGAGAAGTTTCACATATATAA 474 0.4093 MVSRIHKRTAMYRNLQLLRSIRYSHSRPKASVLLDVSNYIQCLKKKLQELNQLTVATAWKNADYDPMPKLEVETQEEGFVIKVLSQRSCQGLLVFILEAFEELGLDVLQARVSCADSFSLEALGNKENNEDSNPLDAQLVEQVVSQAIQNWREVSHI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00167 157 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00167 Spst-Chr6 1797767 1799180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00167 - - gmx:100527278 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00167 6 1797767 1799180 Spst6g00167 6 1797767 1799180 ECH
Spst6g00167 6 1797767 1799180 Spst8g00545 8 5145306 5146753 ECH
Spst6g00167 6 1797767 1799180 Spst1g00849 1 10842337 10843992 ECH
Spst1g00849 1 10842337 10843992 Spst6g00167 6 1797767 1799180 ECH
Spst6g00167 6 1797767 1799180 Spst8g00210 8 1788659 1789694 PCT