Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01392 ATGGCAATGGAGACATTTCTATTCACCTCTGAATCCGTCAATGAGGGCCACCCTGACAAGCTCTGCGATCAGATCTCCGACGCAGTGCTTGATGCCTGCCTTGAACAGGATCCTGACAGCAAGGTTGCCTGTGAGACATGCACTAAGACTAATATGGTCATGGTCTTCGGAGAGATTACAACCAAAGCCAACATAGACTATGAGAAGATTGTCCGCAAGACTTGCCGTAAGATAGGATTTGTCTCTGAAGATGTGGGTCTTGATGCTGACAAATGCAAGGTGTTGGTCAACATTGAGCAGCAGAGTCCTGATATTGCTCAGGGTGTGCATGGCCACTTCACCAAGATCCCAGAAGAAGTTGGTGCTGGTGACCAGGGTCACATGTTTGGTTATGCCACTGATGAAACCCCCGAATACATGCCACTGAGCCATGTCCTTGCAACCAAACTCGGAGCTCGCCTTACTGAGGTTAGGAAGAATGGAACCTGTGGTTGGTTGAGACCAGATGGTAAGACACAAGTGACAGTAGAGTACTACAATGAGAATGGTGCCATGGTTCCAGTTCGTGTCCACACGGTACTCATTTCCACCCAGCATGATGAAATAGTTACTAATGAACAAATTGCTGCGGATCTTAAGGAGCATGTTATCAAGCCTGTCATTCCTGAGAAGTACTTGGATGGCAAGACCATCTTCCACCTTAACCCTTCTGGTAGATTTGTCATTGGTGGGCCTCATGGTGATGCTGGTCTCACTGGGAGAAAGATTATCATTGATACTTATGGTGGCTGGGGTGCACATGGAGGTGGTGCTTTCTCAGGAAAGGACCCTACTAAGGTTGATAGAAGTGGTGCCTATGTTGCAAGACAAGCAGCAAAGAGTATTGTAGCAAGTGGACTTGCACGCAGGTGCATTGTTCAGGTCTCCTATGCAATTGGTGTTCCTGATCCATTGTCAGTCTTTATTGACACTTATGGAACTGGAAGGATTCCTGACAAGGAGATTCTTCAACTTGTGAAGGAGAATTTTGACTTCAGGCCTGGAATGATCACCATTAACTTGGGTCTCAAGAGGGGTGGCCATAGATTCCTCAAGACAGCTGCCTATGGACACTTTGGAAGGGAGGACCCTGACTTCACTTGGGAAGTTGTGAAGCCAATCAAGTGGGAGAATCCTCAAGCTTAA 1185 0.4717 MAMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANIDYEKIVRKTCRKIGFVSEDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKIPEEVGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCGWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDEIVTNEQIAADLKEHVIKPVIPEKYLDGKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPDPLSVFIDTYGTGRIPDKEILQLVKENFDFRPGMITINLGLKRGGHRFLKTAAYGHFGREDPDFTWEVVKPIKWENPQA 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01392 394 SUPERFAMILY S-adenosylmethionine synthetase 242 389 IPR022636 GO:0004478|GO:0006556
Spst7g01392 394 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 2 390 IPR002133 GO:0004478|GO:0005524|GO:0006556
Spst7g01392 394 Gene3D - 119 382 - -
Spst7g01392 394 Hamap S-adenosylmethionine synthase [metK]. 4 394 IPR002133 GO:0004478|GO:0005524|GO:0006556
Spst7g01392 394 Pfam S-adenosylmethionine synthetase, C-terminal domain 242 382 IPR022630 GO:0004478|GO:0006556
Spst7g01392 394 CDD S-AdoMet_synt 7 385 - -
Spst7g01392 394 FunFam S-adenosylmethionine synthase 136 243 - -
Spst7g01392 394 Pfam S-adenosylmethionine synthetase, N-terminal domain 6 103 IPR022628 GO:0004478|GO:0006556
Spst7g01392 394 NCBIfam methionine adenosyltransferase 7 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
Spst7g01392 394 FunFam S-adenosylmethionine synthase 264 382 - -
Spst7g01392 394 Gene3D - 13 281 - -
Spst7g01392 394 ProSitePatterns S-adenosylmethionine synthase signature 1. 121 131 IPR022631 GO:0004478|GO:0006556
Spst7g01392 394 Gene3D - 6 244 - -
Spst7g01392 394 SUPERFAMILY S-adenosylmethionine synthetase 118 241 IPR022636 GO:0004478|GO:0006556
Spst7g01392 394 ProSitePatterns S-adenosylmethionine synthase signature 2. 268 276 IPR022631 GO:0004478|GO:0006556
Spst7g01392 394 Pfam S-adenosylmethionine synthetase, central domain 119 240 IPR022629 GO:0004478|GO:0006556
Spst7g01392 394 PIRSF MAT 1 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Spst7g01392 394 SUPERFAMILY S-adenosylmethionine synthetase 5 111 IPR022636 GO:0004478|GO:0006556
Spst7g01392 394 FunFam S-adenosylmethionine synthase 13 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01392 Spst-Chr7 60238679 60239863 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01392 K00789 - gmx:100777770 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02361 1 32224178 32225359 Spst7g01392 7 60238679 60239863 ECH
Spst7g01392 7 60238679 60239863 Spst7g01392 7 60238679 60239863 ECH
Spst3g02884 3 78350288 78351466 Spst7g01392 7 60238679 60239863 ECH
Spst1g02440 1 33080157 33081341 Spst7g01392 7 60238679 60239863 PCT