Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02884 ATGGCAGAGACTTTCCTATTTACATCTGAGTCCGTGAACGAGGGACACCCTGATAAGCTCTGTGACCAAATCTCCGATGCTGTGCTTGATGCTTGCCTTGAGCAGGATCCAGACAGCAAGGTAGCTTGTGAGACATGCACCAAAACCAATTTGGTCATGGTCTTCGGAGAAATCACCACCAAGGCCAACGTTGACTACGAGAAGATCGTGCGTGACACCTGCAGGAATATCGGATTCGTTTCAAACGATGTGGGACTCGATGCCGACAACTGCAAGGTCCTTGTAAACATTGAGCAGCAGAGCCCTGATATTGCCCAGGGTGTGCATGGCCACCTCACCAAAAGACCTGAAGAAATCGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCCACCGACGAGACCCCTGAATTGATGCCATTGAGTCACGTTCTTGCAACAAAATTGGGTGCTCGTCTCACTGAGGTTCGCAAGAACGGCACCTGCCCTTGGCTGAGGCCTGATGGGAAGACCCAAGTGACTGTTGAGTATTACAATGACAAGGGTGCCATGGTTCCGGTTCGTGTCCACACCGTGCTTATCTCAACACAACATGATGAGACTGTCACCAACGATGAAATTGCTGCTGATCTCAAGGAGCACGTGATCAAGCCTGTGATCCCCGAGAAGTACCTTGATGAGAAGACCATTTTCCACTTGAACCCCTCTGGCCGCTTCGTCATAGGTGGTCCTCATGGTGATGCTGGTCTTACTGGCAGGAAAATCATTATTGATACCTATGGAGGATGGGGTGCCCATGGTGGTGGTGCCTTCTCTGGGAAGGACCCTACCAAGGTTGATAGGAGTGGTGCTTACATTGTGAGGCAGGCTGCTAAGAGCATTGTGGCCAGTGGACTTGCCAGGAGGTGCATTGTGCAAGTGTCTTACGCTATTGGAGTGCCTGAACCTTTGTCTGTTTTCGTTGATACCTATGGGACTGGGAAGATCCCTGACAAGGAGATCCTGAACATTGTGAAGGAGAACTTTGATTTCAGGCCTGGTATGATTTCCATCAACCTTGATCTGAAGAGGGGTGGGAATGGCAGGTTCTTGAAGACTGCTGCATATGGACACTTTGGCAGAGAGGACCCTGACTTCACATGGGAAGTGGTCAAGCCCCTCAAGTGGGAAAAGGCCTAA 1179 0.5055 MAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRNIGFVSNDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILNIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWEKA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02884 392 Gene3D - 5 243 - -
Spst3g02884 392 FunFam S-adenosylmethionine synthetase 1 12 117 - -
Spst3g02884 392 Pfam S-adenosylmethionine synthetase, C-terminal domain 241 382 IPR022630 GO:0004478|GO:0006556
Spst3g02884 392 SUPERFAMILY S-adenosylmethionine synthetase 4 110 IPR022636 GO:0004478|GO:0006556
Spst3g02884 392 CDD S-AdoMet_synt 6 385 - -
Spst3g02884 392 SUPERFAMILY S-adenosylmethionine synthetase 116 240 IPR022636 GO:0004478|GO:0006556
Spst3g02884 392 FunFam S-adenosylmethionine synthase 138 242 - -
Spst3g02884 392 Gene3D - 12 280 - -
Spst3g02884 392 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 2 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Spst3g02884 392 FunFam S-adenosylmethionine synthase 263 382 - -
Spst3g02884 392 NCBIfam methionine adenosyltransferase 6 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
Spst3g02884 392 Hamap S-adenosylmethionine synthase [metK]. 3 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Spst3g02884 392 Pfam S-adenosylmethionine synthetase, N-terminal domain 5 102 IPR022628 GO:0004478|GO:0006556
Spst3g02884 392 FunFam S-adenosylmethionine synthase 118 137 - -
Spst3g02884 392 SUPERFAMILY S-adenosylmethionine synthetase 241 389 IPR022636 GO:0004478|GO:0006556
Spst3g02884 392 Gene3D - 118 382 - -
Spst3g02884 392 Pfam S-adenosylmethionine synthetase, central domain 118 239 IPR022629 GO:0004478|GO:0006556
Spst3g02884 392 PIRSF MAT 1 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Spst3g02884 392 ProSitePatterns S-adenosylmethionine synthase signature 1. 120 130 IPR022631 GO:0004478|GO:0006556
Spst3g02884 392 ProSitePatterns S-adenosylmethionine synthase signature 2. 267 275 IPR022631 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02884 Spst-Chr3 78350288 78351466 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02884 K00789 - gmx:100799139 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02884 3 78350288 78351466 Spst3g02884 3 78350288 78351466 ECH
Spst3g02884 3 78350288 78351466 Spst1g02361 1 32224178 32225359 ECH
Spst3g02884 3 78350288 78351466 Spst7g01392 7 60238679 60239863 ECH