Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01140 ATGGGGGAGAAGCTGGGATTGGGGGCAAAAGAAGCAAGGGGACAAGAGAGAGGAGGCGATGCTGACAATGTTGGTGGACTTGTAGCAATCAAAACAGTGTTAAGGACAGTGCTTGAAAATGTTGGTGGTGATGAAACTAATAATCATGTAAAGGAAGAAGGGAATAATGAGATGTTTCCGTCTCTCTTAATTGTTGCTTTCGTTGATGAATCAAAAAGATCACAAAGAGAGGCTCACAAAAAGGCCACTAATGGTTGCTGGTGGTACACGGCTGATAGAAGGAATTTCCCTTCATCACAGGAAGATATTATATGCATCTGGCTTTGCTGTGCTGAGAAAGTCTTCACATTTTATGGTTATGGTGTCATAGCCTGTCTACTAATTGAGGAGGCATATGCACAGCCATTAGATGCAATTCATTTTTTATCTCATGGTTTTGGACTTGTAATAAGTCTAAGAATTTTCTGTGCTACCAAGATGGACAGGGTTATGAGGTTGGCCACAGAAAAGGGTGTGGTGGTTTTCACCAAGAGCTCTTGTTGCCTCTGCTATGCAGTCACCATTCTGTTCCAAGAACTTGGAGTGATCCCTGTGGTTCATGAAATTGACAAAGAGCCTGAAGGCAAGGAAATGGAGCGAGCTATAACTAGGTTGGGTTGTCCTGCACCTGTTCCAGCAGTGTTCATCGGAGGGAAGCTTGTGGGGTCCACCAATGAGGTCATGTCCCTCCACCTCAGTGGCTCACTCACTCAACTGCTGAAACCATATCGAACTTTATCTTAA 783 0.4406 MGEKLGLGAKEARGQERGGDADNVGGLVAIKTVLRTVLENVGGDETNNHVKEEGNNEMFPSLLIVAFVDESKRSQREAHKKATNGCWWYTADRRNFPSSQEDIICIWLCCAEKVFTFYGYGVIACLLIEEAYAQPLDAIHFLSHGFGLVISLRIFCATKMDRVMRLATEKGVVVFTKSSCCLCYAVTILFQELGVIPVVHEIDKEPEGKEMERAITRLGCPAPVPAVFIGGKLVGSTNEVMSLHLSGSLTQLLKPYRTLS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01140 260 PANTHER GLUTAREDOXIN 160 255 IPR011905 -
Spst7g01140 260 Pfam Glutaredoxin 172 234 IPR002109 -
Spst7g01140 260 MobiDBLite consensus disorder prediction 1 20 - -
Spst7g01140 260 FunFam Glutaredoxin family protein 160 260 - -
Spst7g01140 260 MobiDBLite consensus disorder prediction 1 18 - -
Spst7g01140 260 Gene3D Glutaredoxin 157 259 - -
Spst7g01140 260 ProSiteProfiles Glutaredoxin domain profile. 160 260 - -
Spst7g01140 260 NCBIfam glutaredoxin-like family 163 257 IPR011905 -
Spst7g01140 260 CDD GRX_GRXh_1_2_like 172 252 - -
Spst7g01140 260 SUPERFAMILY Thioredoxin-like 160 256 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01140 Spst-Chr7 35218986 35229168 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01140 160 254 Miscellaneous Gene Families AT4G15670 48.421 6.51e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01140 K03676 - gmx:100527558 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01140 7 35218986 35229168 Spst7g01140 7 35218986 35229168 ECH
Spst1g02580 1 34329543 34329842 Spst7g01140 7 35218986 35229168 PCT
Spst7g01140 7 35218986 35229168 Spst1g02579 1 34327000 34327308 PCT