Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02579 ATGGATAGAGTTAAGGACTTGGCATCAAAGAAGGCTGCTGTTATATTTACCAAGAGTTCATGTTGCATGTGTCACAGCATCAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCAGCAGTTCATGAGCTTGACAATGACTCCTATGGGAGGGAAATGGAATGGGCTTTAAGGGGTATGGGTTGTAATCCTTCAGTTCCAGCAGTGTTCATAGGTGGAAAATTTGTGGGTTCATCCAAAGATGTCATATCCCTCCATGTTGATGGTTCTCTCAAACAATTGCTCATGGATGCAAAGGCCATCTGGTTTTAG 309 0.4337 MDRVKDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGREMEWALRGMGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQLLMDAKAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02579 102 FunFam Glutaredoxin family protein 1 101 - -
Spst1g02579 102 Pfam Glutaredoxin 14 75 IPR002109 -
Spst1g02579 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Spst1g02579 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Spst1g02579 102 CDD GRX_GRXh_1_2_like 12 93 - -
Spst1g02579 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Spst1g02579 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Spst1g02579 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Spst1g02579 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Spst1g02579 102 NCBIfam glutaredoxin-like family 4 101 IPR011905 -
Spst1g02579 102 Gene3D Glutaredoxin 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02579 Spst-Chr1 34327000 34327308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02579 1 102 Miscellaneous Gene Families AT4G15700 49.020 7.67e-36 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02579 K03676 - gmx:100819447 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02579 1 34327000 34327308 Spst1g02579 1 34327000 34327308 ECH
Spst1g02579 1 34327000 34327308 Spst7g01139 7 35218319 35218627 PCT
Spst7g01140 7 35218986 35229168 Spst1g02579 1 34327000 34327308 PCT