Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02580 ATGGACAAGTTGATGAGGTTGGCCTCTGAAAAGGGTGTGGTGATTTTCACGAAGAGCTCATGTTGCCTCTGCTATGCAGTCAACATTCTGTTTCAAGAACTTGGCGTGAGTCCTGTGGTTCATGAGATTGATCATGAACCTGAAGGCAGAGAAATGGAGAAAGCTCTATTCAGGCTAGGCTGCACTGCTCCAGTCCCAGCTGTGTTCATCGGAGGGAAGCTAATGGGATCCACCAATGAAATCATGTCTCTCCACCTAAGTGGTTCACTCACTCAATTGCTGAAACCTTACCAGACTTAG 300 0.47 MDKLMRLASEKGVVIFTKSSCCLCYAVNILFQELGVSPVVHEIDHEPEGREMEKALFRLGCTAPVPAVFIGGKLMGSTNEIMSLHLSGSLTQLLKPYQT 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02580 99 NCBIfam glutaredoxin-like family 5 97 IPR011905 -
Spst1g02580 99 FunFam Glutaredoxin family protein 1 99 - -
Spst1g02580 99 Pfam Glutaredoxin 13 74 IPR002109 -
Spst1g02580 99 Gene3D Glutaredoxin 2 99 - -
Spst1g02580 99 PANTHER GLUTAREDOXIN 1 95 IPR011905 -
Spst1g02580 99 ProSiteProfiles Glutaredoxin domain profile. 1 99 - -
Spst1g02580 99 CDD GRX_GRXh_1_2_like 13 93 - -
Spst1g02580 99 SUPERFAMILY Thioredoxin-like 2 97 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02580 Spst-Chr1 34329543 34329842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02580 1 95 Miscellaneous Gene Families AT4G15670 50.526 2.07e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02580 K03676 - gmx:100499748 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02580 1 34329543 34329842 Spst1g02580 1 34329543 34329842 ECH
Spst1g02580 1 34329543 34329842 Spst7g01140 7 35218986 35229168 PCT