Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01136 ATGGATTTGCTGGCAACTTTGACTGCTGACAAGCCAGTAGTGATCTTCAGCAAGAGCAATTGTTGCATTAGCCATTCTGTGAAGGCTCTCATATGCAGCTTCGGTGCCAACCCTACAGTTATCGAGGTTGACAAAATGGAAAATGGGCAACAAATAGAGAGGGCACTGATTCAACTGGGTTGTCGCCCAACTGTACCAGCAGTGTTCATCGGACAACAACTTATAGGTGGTGCTGAAGAACTCATAAGGCTCAACGTCCAAAACAATCTTGCTCAGTTGCTTTTAAGGGCTAGAGCTATATTTATTTGGAGTCCATAA 318 0.4434 MDLLATLTADKPVVIFSKSNCCISHSVKALICSFGANPTVIEVDKMENGQQIERALIQLGCRPTVPAVFIGQQLIGGAEELIRLNVQNNLAQLLLRARAIFIWSP 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01136 105 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Spst7g01136 105 SUPERFAMILY Thioredoxin-like 2 98 IPR036249 -
Spst7g01136 105 Pfam Glutaredoxin 13 75 IPR002109 -
Spst7g01136 105 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Spst7g01136 105 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Spst7g01136 105 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Spst7g01136 105 CDD GRX_GRXh_1_2_like 12 93 - -
Spst7g01136 105 PANTHER GLUTAREDOXIN 2 101 IPR011905 -
Spst7g01136 105 Gene3D Glutaredoxin 2 102 - -
Spst7g01136 105 NCBIfam glutaredoxin-like family 6 101 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01136 Spst-Chr7 34981869 34982186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01136 1 102 Miscellaneous Gene Families AT4G15690 49.020 2.48e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01136 K03676 - gmx:106794948 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01136 7 34981869 34982186 Spst7g01136 7 34981869 34982186 ECH
Spst1g02577 1 34313434 34313742 Spst7g01136 7 34981869 34982186 PCT
Spst7g01136 7 34981869 34982186 Spst1g02576 1 34308661 34309171 PCT