Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02577 ATGGACATGATCACAAGCATGGTAGCTGAAAAGCCTGTGGTGATATTCAGCAAGAGCACATGTTGCTTGAGCCACTCCATGACATCACTGATACGTAGCTTTGGAGCAAACCCTACTATTCATGAGCTGGATGAGATGGCCAATGGCCAGGAGATTGAAAGTGCATTGCTTCAGATGGGGTGCCAACCAAGTGTTCCTGCTGTGTTCATAGGACAACGATTCATTGGTGGCTCTAAGAAAATCATGAGCCTGCATGTCAGGAATGAATTGGTACCACTTCTCAAGAATGCTGGGGCTATATGGATTTGA 309 0.4595 MDMITSMVAEKPVVIFSKSTCCLSHSMTSLIRSFGANPTIHELDEMANGQEIESALLQMGCQPSVPAVFIGQRFIGGSKKIMSLHVRNELVPLLKNAGAIWI 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02577 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Spst1g02577 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Spst1g02577 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Spst1g02577 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Spst1g02577 102 PANTHER GLUTAREDOXIN 1 102 IPR011905 -
Spst1g02577 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Spst1g02577 102 Gene3D Glutaredoxin 1 101 - -
Spst1g02577 102 Pfam Glutaredoxin 13 75 IPR002109 -
Spst1g02577 102 CDD GRX_GRXh_1_2_like 12 93 - -
Spst1g02577 102 NCBIfam glutaredoxin-like family 5 102 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02577 Spst-Chr1 34313434 34313742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02577 1 102 Miscellaneous Gene Families AT4G15690 54.902 2.89e-42 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02577 K03676 - gmx:100789514 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02577 1 34313434 34313742 Spst7g01136 7 34981869 34982186 PCT
Spst7g01139 7 35218319 35218627 Spst1g02577 1 34313434 34313742 PCT