Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02576 ATGGATGTGTTGACAACATTGACTGCAGACAAGCCAGTGGTGATCTTCAGCAAGAGCAATTGCTGCATGAGCCACACAGTGAAGGCTCTCATAAGCAGCTTTGGTGCCAACCCTGCAGTTATTGAGGTTGACAAAATGGCAAGTGGCCAACAAGTAGAGAGAGCACTGGTCCAGCTAGGTTGTCGCCCTAGTGTGCCTGCAGTGTTCATCGGACAAAAATTCATAGGTGGTGCTGAAGAAGTCATCAAACTCAATGTTCAAAACAAGCTTGCCCAATTGCTTCTCGGGGCTAAAGCCATATTTATCTGGACAGAACAGCACTAG 324 0.4722 MDVLTTLTADKPVVIFSKSNCCMSHTVKALISSFGANPAVIEVDKMASGQQVERALVQLGCRPSVPAVFIGQKFIGGAEEVIKLNVQNKLAQLLLGAKAIFIWTEQH 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02576 107 NCBIfam glutaredoxin-like family 6 101 IPR011905 -
Spst1g02576 107 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Spst1g02576 107 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Spst1g02576 107 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Spst1g02576 107 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Spst1g02576 107 Gene3D Glutaredoxin 2 106 - -
Spst1g02576 107 SUPERFAMILY Thioredoxin-like 2 99 IPR036249 -
Spst1g02576 107 CDD GRX_GRXh_1_2_like 12 93 - -
Spst1g02576 107 Pfam Glutaredoxin 13 75 IPR002109 -
Spst1g02576 107 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02576 Spst-Chr1 34308661 34309171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02576 1 102 Miscellaneous Gene Families AT4G15690 46.078 2.07e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02576 K03676 - gmx:100803979 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02576 1 34308661 34309171 Spst1g02576 1 34308661 34309171 ECH
Spst7g01136 7 34981869 34982186 Spst1g02576 1 34308661 34309171 PCT