Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00660 ATGGGTTGCTTTTTTGGTTGTTTTGGTTCCTCCAAACACTCGAAGAACAAGCGCAACGTTCTTAGAAATGGTAGTAGCAATGGCAAGCAAGAGCAACCTGGTGTCTCTTTGGTTCAGGATTGCTCCAAAATTGCTGTTAATCCTATACCCCAACTCCAGGAGAAAAGTGAGGAGCAACTAAGTGTAAATAGCAGAAAGAAAGTGACGTTTGATTCCAATGTGAAGACCTATGAACCTACTTTGGTGGATGAAGTTGGAGCGAGGAAGAGTGAGGAGGGTGGAAACGAGGAAGCTTTGGTTCAATCAAAGTCATCTTCCTCTGAAGATAATAGTTCTGTGACTTCAACGGGGTCTTACCCTCCCAACCATAGGTACCAGAATTGCCGGGACAGTGATGACGAGGAGGAAGAAATTGATTATGGGGAAAGTGATCTTAGTGATGAAGATGATGATGTCATCAGAGAAGAGTGCAAAGAATTGGGTGCGGACTTTGGAGAAGATGGCATAGTTGCAACTACTGCTGCTGATCATGTGTTTGTTGAAGAGGTTGATGTGAAGGCAATTGATTCCAACCCCAATGCTAGAGACAGAAGTGTTTATGTTCATCCTGTACTGAACCCAGTGGAGAATCTCACTCAGTGGAAAGTTGTTAAGGCTAAGAAGACACCAGTAAGGCCTCAGAAAGAGAACGAGTTTGGGAATGGTGTCAAAGAATCACCTTTCAGCTTGAAATCAGAAAGTGACACATCAAAGAAGTTGAACCAAGAGATCCCAGTTGATGCCAGCCTGTCAAATTGGTTGGTCTTACCAGAAACTACACCTGTTAAAAAGGCTGGCTCAGTGGCTTTATTTGGTGGTACCCCTGAGAGGAGCACCCCACAAAGTCCATATTCTGTGTTAAGTCATGAAGATAGGCCAATTTTAGGTGCATTGACATTGGAAGAGATCAAACAATTTTCGGCTACTTCTTCTCCGAGGAAGTCACCTAGTAGGAGTCCAGATGAGATGCCTATTATTGGCACTGTTGGGACCTACTGGAATGTTGCAGGCTCTGCTGAAGGTCCTGGCTCAGCCTCTTCCTTTAAAGGAATTCCGAACTCAACAAGCAAGTACAGAGAGGATAAGAGAGTGAATTGGCACTCAACCCCTTTTGAGACAAGATTAGAGAAAGCTTTGAATAGAGGAGCTGCTTCATATGTCCCTCGTGTATTTTAG 1215 0.4403 MGCFFGCFGSSKHSKNKRNVLRNGSSNGKQEQPGVSLVQDCSKIAVNPIPQLQEKSEEQLSVNSRKKVTFDSNVKTYEPTLVDEVGARKSEEGGNEEALVQSKSSSSEDNSSVTSTGSYPPNHRYQNCRDSDDEEEEIDYGESDLSDEDDDVIREECKELGADFGEDGIVATTAADHVFVEEVDVKAIDSNPNARDRSVYVHPVLNPVENLTQWKVVKAKKTPVRPQKENEFGNGVKESPFSLKSESDTSKKLNQEIPVDASLSNWLVLPETTPVKKAGSVALFGGTPERSTPQSPYSVLSHEDRPILGALTLEEIKQFSATSSPRKSPSRSPDEMPIIGTVGTYWNVAGSAEGPGSASSFKGIPNSTSKYREDKRVNWHSTPFETRLEKALNRGAASYVPRVF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00660 404 MobiDBLite consensus disorder prediction 132 151 - -
Spst7g00660 404 MobiDBLite consensus disorder prediction 55 151 - -
Spst7g00660 404 MobiDBLite consensus disorder prediction 225 249 - -
Spst7g00660 404 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 395 IPR039300 GO:0007142
Spst7g00660 404 MobiDBLite consensus disorder prediction 12 36 - -
Spst7g00660 404 MobiDBLite consensus disorder prediction 20 36 - -
Spst7g00660 404 MobiDBLite consensus disorder prediction 97 125 - -
Spst7g00660 404 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00660 Spst-Chr7 6594070 6595644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00660 - - gmx:100793067 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00660 7 6594070 6595644 Spst7g00660 7 6594070 6595644 ECH
Spst7g00660 7 6594070 6595644 Spst6g00491 6 4479535 4481565 ECH
Spst1g03066 1 39221366 39222831 Spst7g00660 7 6594070 6595644 ECH
Spst1g03066 1 39221366 39222831 Spst7g00660 7 6594070 6595644 PCT
Spst6g00491 6 4479535 4481565 Spst7g00660 7 6594070 6595644 PCT