Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03066 ATGGGTTGTTTTCTTCATTGCTTTGGTTCCTCCACAAGCACCAAACTTAAGCGCAAGGCTCACCATCACCATCGAAATGCTAGAGACAGGTTTGAACGACCAACGGTGTGTTCTGTTCAGGATTACTCCCAAATGGTGGTAATTAGCACTGCATCACAAGAAGTACAGGCTAAACCTTTGGAGAAGCTAAAGGTGAGTCCCAAAAAGAAAGTGACCTTCGACGTCAATGTGAAAACATACGAGCCAGATGAAGTTGTTGATTTCCAACAAGAGAAGAGAGAAGAGAAAAGACCTTTGGTTGAAAAGTTAAGCCAAACAAAGTCTTACTCTGAAGAAAGTTTGGTGACTTCAGCAGGGTCTTATCCAACAAACCATAGGTACCACTATTGCACATGTAGTGATGATGAAGATGGAGCATGGGAAGATTGGGACAGTGATCTTACTGATGAGGATGAAGGTGATGGTTGTGATAGTGACATGGGAGAAGAGTATGATGAAGTGGGAGAGGACTTTGAAGATGGAATAGTGTACTCAAGGTCTAAAAATGGAGTCAATCAAGGGATTTTTGAAGAGGTGGAAAGTCCAATTCCAATGCATGATAAGGATGTGAAGTCAATTGGGTTAAACCCCAATGTTCGAGATAGGAGTATGTATGTTCATTCTGTGCTGAACCCTGTGGAGAACCTCACTCAATGGAAAGCAGTTAAGGCTAAAAGAGCACCACCACCATTGGTGTCTCAGAAGGAAAATTTGGTTTTGAATCAAGAGTCCCGAGCTGCATTTGGTGCTGAATCACCTAAGAAGTTGAACGGAGAAATTGCGGTTGATGCTAGTCTTTCAAATTGGTTGACTTCATCAGAAACTACACCTGTTGGCAAGGGTTTGTACGAGGGTACCCCAGAGAGGAGTAGCTCAGAAGGCTCAAATTCTGTGGTGAGTTATGAAGATAGGCCTATCTTAGGTGCATTGACAGTTGAAGAGCTTAAACAGTTTTCAGCTTCTTGTTCAGCAAGAAAATCGTCAAGAGATGAGATGCCAATCATGGGCATGGTTGGTAGCTACTGGAACTGTGGGGGCAATGCTCCAGATTCTAGCTCAGCAAATCGAGTAAGTTCAAGAAGGTTACAATACAATTGA 1137 0.4283 MGCFLHCFGSSTSTKLKRKAHHHHRNARDRFERPTVCSVQDYSQMVVISTASQEVQAKPLEKLKVSPKKKVTFDVNVKTYEPDEVVDFQQEKREEKRPLVEKLSQTKSYSEESLVTSAGSYPTNHRYHYCTCSDDEDGAWEDWDSDLTDEDEGDGCDSDMGEEYDEVGEDFEDGIVYSRSKNGVNQGIFEEVESPIPMHDKDVKSIGLNPNVRDRSMYVHSVLNPVENLTQWKAVKAKRAPPPLVSQKENLVLNQESRAAFGAESPKKLNGEIAVDASLSNWLTSSETTPVGKGLYEGTPERSSSEGSNSVVSYEDRPILGALTVEELKQFSASCSARKSSRDEMPIMGMVGSYWNCGGNAPDSSSANRVSSRRLQYN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03066 378 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 365 IPR039300 GO:0007142
Spst1g03066 378 MobiDBLite consensus disorder prediction 359 378 - -
Spst1g03066 378 MobiDBLite consensus disorder prediction 289 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03066 Spst-Chr1 39221366 39222831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03066 - - gmx:100808067 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03066 1 39221366 39222831 Spst1g03066 1 39221366 39222831 ECH
Spst1g03066 1 39221366 39222831 Spst6g00491 6 4479535 4481565 ECH
Spst1g03066 1 39221366 39222831 Spst7g00660 7 6594070 6595644 ECH
Spst1g03066 1 39221366 39222831 Spst7g00660 7 6594070 6595644 PCT