Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00491 ATGAGGTGCTTTCCACCATGTTTTCGAACTTCTAAACGTCGCAACCAATTGCGTTCCAAGGATGCAACTCTCGCACAAACCCATGTGGGAGAAGGAGCTGTTGAGCCTCTTGCACGGCAGAAGACTGCTGTTGAAGAACTCATTGATTGCATAGCAGAATCAAAAATAAGAAATGAAGAGCAATCAAATAACAGTGTTGAAACCAAGGAGGAGCGGGAAAAAGAGTCAAGGGAAGGGGAAGCACCGCAGATAGATGAGAAGAAGGATGACCATGAAGGAGATCATGAGATTAGTGAAAAATCGCATCAAGAAGAGTCTTCAGAGTCACTGTTCTCTCTGTCCGTTTGTTCTAGAAAAAAAGTTTCAGATGCTGAAACTGTGGAGCCTGAAGTCAATAGTCCAATACAACTGGTATGCACAAGAGAGGTACCTCAAGCATTAGGGTCATCCCCAAGTGCACCACTTCAAAATGTTTCGTCCATTCTGAGTCTACCTGAAAATTTTGCCCAAGAAAAGGCACCTTCTAAGGAGAAGGAGGAAGAATATTCTGACAAGGGACAAATCAAGAAGTTGGACGATAAGGAAAGGGAAAAAGGGAAAGCAACTCACCCTGTGCTAAAGTATAGGTACAGAGACTGCCCGGATGACGAATACGATGATGTTAGTTTAGATGTAAGTGATTTGGATGCTACGCTCGAAGATGAAGATCCTCACAGTGAGAAGAGAGAAAGGGGGGAAGAAGGCGCTGATGTTAACCGAACATGGGTTCAAGAAGAGTCTTCAGAATCTCTGTTTTCTCTGTCTGCTGATTCCAGAATACGGATTTCATCAGCTGAAGCAGAGAATGAAGTTAACAGTCTAATGTCAGCCCATGCTACAACCCAGATCACACAAGAAGAAAGACAAGGAAAGAAACCAGATGTTTACTCAGTGCTAAATCCAATTGAAAATCTTACCAAAGGGAGGGTAGTCAAAGCAACAGAGGTACATCCACTGGAGATCGATAAAGAAAACATCAACTTGGTAGATGTTAACATACCCATTAGTCCACAGCCTACTTTGAAGCTGTCAAAACGCAAGACTAGGCAGTTCAGTGACAACAAACGAAGCCAAGAAATTGGGGTAGACACCAGCCTCTCGAGCTGGTTGGTTGAATCGGAAACCACACCTATTTCTCTTGATAGAACCAGTTCTGTAGGAGAACATACACCAAAAGGAAGAAGAGGTTCACCGTGGAGTCACGAGGACAGGCCAATTTTAGGAGCATTAACAGTTGAAGAAATCAGGATGTATTCTTTATCTGCATCTTCAAGAAAGTCTAGAAGCCAGAGTCCAGACGAGACACCCATCATAGGTACTGTTGGAAGCTACTGGAGTCACACTGAACAGAGCATGGATTTGCAATTCAACAAAACTGGAAAGGATGTAACACCAAGGAGGAGTTCAACGGCATTTCAGACAAGACTAGAAGCAGTATATGATGCTAGTGTTTCAGATGTTTTGAGCAAAGGGCCAAAGGGTTCAACCCTGGAAGAATGTTGA 1542 0.4339 MRCFPPCFRTSKRRNQLRSKDATLAQTHVGEGAVEPLARQKTAVEELIDCIAESKIRNEEQSNNSVETKEEREKESREGEAPQIDEKKDDHEGDHEISEKSHQEESSESLFSLSVCSRKKVSDAETVEPEVNSPIQLVCTREVPQALGSSPSAPLQNVSSILSLPENFAQEKAPSKEKEEEYSDKGQIKKLDDKEREKGKATHPVLKYRYRDCPDDEYDDVSLDVSDLDATLEDEDPHSEKRERGEEGADVNRTWVQEESSESLFSLSADSRIRISSAEAENEVNSLMSAHATTQITQEERQGKKPDVYSVLNPIENLTKGRVVKATEVHPLEIDKENINLVDVNIPISPQPTLKLSKRKTRQFSDNKRSQEIGVDTSLSSWLVESETTPISLDRTSSVGEHTPKGRRGSPWSHEDRPILGALTVEEIRMYSLSASSRKSRSQSPDETPIIGTVGSYWSHTEQSMDLQFNKTGKDVTPRRSSTAFQTRLEAVYDASVSDVLSKGPKGSTLEEC 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00491 513 MobiDBLite consensus disorder prediction 166 260 - -
Spst6g00491 513 MobiDBLite consensus disorder prediction 232 253 - -
Spst6g00491 513 MobiDBLite consensus disorder prediction 52 106 - -
Spst6g00491 513 MobiDBLite consensus disorder prediction 171 216 - -
Spst6g00491 513 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 188 494 IPR039300 GO:0007142
Spst6g00491 513 MobiDBLite consensus disorder prediction 390 416 - -
Spst6g00491 513 MobiDBLite consensus disorder prediction 52 114 - -
Spst6g00491 513 MobiDBLite consensus disorder prediction 217 231 - -
Spst6g00491 513 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00491 Spst-Chr6 4479535 4481565 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00491 - - pvu:PHAVU_006G104900g 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00660 7 6594070 6595644 Spst6g00491 6 4479535 4481565 ECH
Spst1g03066 1 39221366 39222831 Spst6g00491 6 4479535 4481565 ECH
Spst6g00491 6 4479535 4481565 Spst6g00491 6 4479535 4481565 ECH
Spst6g00491 6 4479535 4481565 Spst7g00660 7 6594070 6595644 PCT