Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00371 ATGGGTTCTGAACAACATCCTATGCTTCCTGTTCTACATTTCACCAAAGAAGATTTGAAACCAGGGACCGAATCCTGGTTAGCAACATGCAGAAGTGTGCGCCAAGCACTTGAAGAACATGGTTGCTTTGTAGCTGTGTATGATAAAGCTTCTGATGAGCTACAAAATGGTGTATTTTGTTCCATGAAGGAGCTTTTCGATCTCCCAACAGAAACCAAACAAAGAAACACATATGAGGGCGCGCCCTTGAAAGGCTACGTTGGACAACACCCCAAGATTCCTCTCCACCAAAGCATGGGTATAGATGAGGGAGCAACACTGGAGGGAATTCAAAGGTTTTCCCAAAAAATGTGGCCCAAAGGCAATGATGAATTTTGTAAATATATATTTGAGTATGCCAAGGTAGCTGAAGAATTGGATCGAATGGTGGCGAGAATGATATTTGAAAGTTATGGCCTTTTAGAGTACTATGACGCATACATAGGGTCTACAAGTTATCTCCTTAGGCTTTTGGCACACCAAGCACCAGAACAGGTTGAGCCTCAACTGGGTCTTGTGGCTCACACTGACAAGAGCTTCACCACAATTCTTCATCAAAATCATGTCAATGCACTGATGGTGGAGACAAGGAATGGTACCTGGATTGATGTTGAATTCTCTTCGGCTACTTCATTTGTCGTCATGGCTGGTGATGGACTCATGGCATGGAGCAACGACAGAATAAAGTCCCCTAATCATAAGGTTTTGATGAGTAATGGGAATGAAACAAGGTACTCTCTTGGTCTGTTTGCCTTCTACAAAGGAATCATGAAAGTGCCTGAAGAGCTCATTGATGAAGAGCATCCAGTGCAATATAAACCGTTTGATCATCTTGCATTGCTGAACTTCACTTACAGTGCTAATATGAAAGCCTATTGTGGAGTGTGA 927 0.4272 MGSEQHPMLPVLHFTKEDLKPGTESWLATCRSVRQALEEHGCFVAVYDKASDELQNGVFCSMKELFDLPTETKQRNTYEGAPLKGYVGQHPKIPLHQSMGIDEGATLEGIQRFSQKMWPKGNDEFCKYIFEYAKVAEELDRMVARMIFESYGLLEYYDAYIGSTSYLLRLLAHQAPEQVEPQLGLVAHTDKSFTTILHQNHVNALMVETRNGTWIDVEFSSATSFVVMAGDGLMAWSNDRIKSPNHKVLMSNGNETRYSLGLFAFYKGIMKVPEELIDEEHPVQYKPFDHLALLNFTYSANMKAYCGV 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00371 308 Gene3D - 2 302 IPR027443 -
Spst7g00371 308 Pfam non-haem dioxygenase in morphine synthesis N-terminal 23 88 IPR026992 -
Spst7g00371 308 Pfam 2OG-Fe(II) oxygenase superfamily 172 264 IPR044861 -
Spst7g00371 308 SUPERFAMILY Clavaminate synthase-like 9 302 - -
Spst7g00371 308 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 291 - -
Spst7g00371 308 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 266 IPR005123 -
Spst7g00371 308 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00371 Spst-Chr7 2918844 2920017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00371 119 286 Glycosyltransferase AT5G59530 29.050 5.60e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00371 - - gmx:100809268 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03448 1 43246891 43248400 Spst7g00371 7 2918844 2920017 PCT
Spst7g00371 7 2918844 2920017 Spst1g03447 1 43241104 43243210 PCT