Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03448 ATGATGGGATCCCAAACACAGTCTCAACTTCATGTGGTGGACTTCACTGACGCAACCATGAAACCTGGCACCGACGCATGGCTCTCAGCCTGCACTCTTGTTAGGTCTGCGCTTGAAGACAATGGTTGTTTCGTGGCACGCTATGATTCAATTGGCAAAGACCTTTGTGACTCTGTTGTATCTGCAATAGAACAGTTGTTTAGTCTCCCACTGGAAACAAAAAGACAAAAAACCTGCGACAAACCTTTCCATGGCTACTTAGGACAAGTCTCGTGGATTCCCTTGTTTGAGTCTTTGGGCATTGATGATCCTTTGACCTTACAAGGGTGCCAAAAATTCACCCACATAATGTGGCCGCAGGGGAATCATCGTTTCTGTGAAAGCATCAATGAGTATGCTAAGTTGTTGGCAGAATTAGACCATATGGCAAAGAGAATGGTGTTTGAGAGCTATGGTGTGGACATAAAAGGATGCGAGCGCATGATAAAATCAAGCGATTATCTGCTACGATGCATAAAATATAGGACACCTGAGATGGATGAAAAGGATACTGGATTAGATTCTCACACGGACTTGACCATCGTATCCATAGTTCATCAGCTGAATCATCTGAATGGCTTGGAAATCAAGCTGAAGGATGAAGAATGGATTGGGGTTGATGCCTCTTCCTCCCTCTTTGTTGTTATGGCAGGTGACGCACTCAATGTATGGAGTAATGGCAGGATACGACCATGTGAGCACAGAGTTACCATGAATGCAAAGAAAACCAGATACTCTATGGGACTATTTTCTTTTAGTGGTGATAAGAATATGCAGATTCCGGATGAGCTAGTTAATGAGCAACATCCCTTGCTTTATAAACCGATTTTCGACCATTATGACTACCTTCGTTTCTATGACAAAGAGAAAATCAAAGAGCCCTATTCTCGAATCAAAGCGTACTGTGGAATCTCAGCCCTATACTAA 966 0.4306 MMGSQTQSQLHVVDFTDATMKPGTDAWLSACTLVRSALEDNGCFVARYDSIGKDLCDSVVSAIEQLFSLPLETKRQKTCDKPFHGYLGQVSWIPLFESLGIDDPLTLQGCQKFTHIMWPQGNHRFCESINEYAKLLAELDHMAKRMVFESYGVDIKGCERMIKSSDYLLRCIKYRTPEMDEKDTGLDSHTDLTIVSIVHQLNHLNGLEIKLKDEEWIGVDASSSLFVVMAGDALNVWSNGRIRPCEHRVTMNAKKTRYSMGLFSFSGDKNMQIPDELVNEQHPLLYKPIFDHYDYLRFYDKEKIKEPYSRIKAYCGISALY 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03448 321 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 3 304 - -
Spst1g03448 321 Pfam non-haem dioxygenase in morphine synthesis N-terminal 12 86 IPR026992 -
Spst1g03448 321 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 297 - -
Spst1g03448 321 SUPERFAMILY Clavaminate synthase-like 8 303 - -
Spst1g03448 321 Gene3D - 2 304 IPR027443 -
Spst1g03448 321 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 266 IPR005123 -
Spst1g03448 321 Pfam 2OG-Fe(II) oxygenase superfamily 177 265 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03448 Spst-Chr1 43246891 43248400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03448 131 287 Glycosyltransferase AT5G59530 27.950 5.97e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03448 - - gmx:100775440 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03448 1 43246891 43248400 Spst7g00371 7 2918844 2920017 PCT