Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00370 ATGGAAAGCCAGAGAGAGTGTGAATATCCCCTTCCTCTTGTTGACTTCTCCAATGAAAACATGAAACCAGGCACCCATACATGGCTTGAAGCCTGTGAAATGGTGCGGAGAGGATTCGAGGATCACGGTTGTTTCCTTGCACGCTTTCATAAGCTTTCTCCACACCTTCTCAACTCCGTTTTCTATGCCATGGAACAACTCTTCGCTCTCCCTCTCCAAACCAAAAGGAGAAAAACCAGTGACAAACCCAACCATGGCTACACCGGACAAGTACCCTCATCCCCTCTGTTCGAATCCTTTGCCATCGACAATCCATCCAACTTTCAAGATTGTCAGAAATTCGCACGCGTAATGTGGCCAACAGGAAATCATCATCTCTGTGAAAGTGTGAACGAGTATGCAAAGTTATTACAAGAGCTGGACCAGACCGTGAAGAGAATGGTGTTTGACAGCTATGGCCTGGACAAGGTGAAATGCGAGTCGTTCCTTGAATCAACCAATTATGCTTTTCGAAGCTACAGGTATAATATACCTGCGATGGATGAGAGCAACGTGGGGGTGAATCCTCATACGGACTCAACCTTCATAACCATTCTGCATCAGAGGGTAGATGGATTGGAAGTTAAATTGAAAGGTGGAGAATGGTTTGGTGTTGATGCCTCGCCTTTGTTTTGTGTCTTGGCTGGTGATGCACTTATGGTATGGAGCAGTGAGAGGATTCGAGCTTGTGAACACCGTGTGATGCTGAAAGAAAAGGTGACAAGGTACTCCTTGGGATTACTTTCATACAGTACAAAGATGGTGGAGACTTTAGAGGATCTGGTCGATGAGGAACATCCCATACGCTATAAGCCATTCGACCATTATTCGTACGTTGGTTTTCGTTTTACTGAGGAAGCCGCAAAATGTACAAGTCGTATCAAAGCTTATTGTGGTCTTTAA 942 0.4512 MESQRECEYPLPLVDFSNENMKPGTHTWLEACEMVRRGFEDHGCFLARFHKLSPHLLNSVFYAMEQLFALPLQTKRRKTSDKPNHGYTGQVPSSPLFESFAIDNPSNFQDCQKFARVMWPTGNHHLCESVNEYAKLLQELDQTVKRMVFDSYGLDKVKCESFLESTNYAFRSYRYNIPAMDESNVGVNPHTDSTFITILHQRVDGLEVKLKGGEWFGVDASPLFCVLAGDALMVWSSERIRACEHRVMLKEKVTRYSLGLLSYSTKMVETLEDLVDEEHPIRYKPFDHYSYVGFRFTEEAAKCTSRIKAYCGL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00370 313 Gene3D - 10 311 IPR027443 -
Spst7g00370 313 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 291 - -
Spst7g00370 313 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 3 300 - -
Spst7g00370 313 Pfam 2OG-Fe(II) oxygenase superfamily 174 258 IPR044861 -
Spst7g00370 313 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 89 IPR026992 -
Spst7g00370 313 SUPERFAMILY Clavaminate synthase-like 9 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00370 Spst-Chr7 2916126 2917228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00370 185 284 Glycosyltransferase AT5G59530 32.110 9.00e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00370 - - pvu:PHAVU_007G248500g 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03447 1 43241104 43243210 Spst7g00370 7 2916126 2917228 PCT
Spst7g00370 7 2916126 2917228 Spst1g03446 1 43237324 43238532 PCT